Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0398 ATGGCGTCGAGTTTCGATCGATGGGAAAAGGATCCTTACTTTACAGCGGCCGAAGAGGTTCAGGAATCTGCCGACAGGATGGAATCTACATATAGGACGTGGACTCGCGCCAAAAAAGATACTTCCAGCAAGTGGGACTCTGATGAACTCCTTAGAGATCTGCAAACTGCCCTTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAACGAGCAGTCAGGTCAAGTTATGGCAAAAGCTCCAGTGATGATGCACAAAATAGGCATCGAGATTTTATTGTTGCCATTGAGGACAAGATTACAAAAGTAGAGCAGTCTTTACAGGAATCCATCGTTGCTGATGGCAAGGCATCTCTGCCTTGGGTGCGTCTGAATGAAGGAGAACGAAATGAGCTTGCATTATTTCTTTCAGGAATTCCAGCAGACGATGGCAACAGTCCCACAAAAAGTAATGGTAGAGATAGTGAAAATCAACAATTAAGGGATAAAGATTCGGTCAGTATTTCAAAAAAATTACTTCTTTCATCTGAGTGGAATTCCTTGGAAGTAAAGGAGGAGAATTCACATGGGCATCGTAGGACAGCTAGTGCTAGTGCTGACATTGGTTCTTGGAAGATTGCAGTTTCTGATGATATGCAACAATATAATTCTTCCAATGGGCCTTTTGGTCCTATGCATAAGGTACCCAGTCTCTCAGGATTTATTAGTTCCATGGAATCTGTCTCTAAGATGAAGTGGCCAAAGAATGCTTTTAGAAAGCTGAAAGCATTGGATAATCATCAAGGAGCTGATAGTGCACTGCTTCCATCTGCTGAATTGAATAGGGGCATCAATGCATGCTACGAAAGAAGTAAGAGCTACCTTGATAGTTGCGACGAATGCTATGATAAGCAACTATATGGGTGGTATGGGGCTATTCAGAGACAACTTCAAAGATCTCAGTACCAAATGCAATACAGTCGACCTGTTCAAATAACTGTCTGGATAGTTCTTCTCCTTTGCTTGATTGTTTTAATTGCATTTCGTGCAATGTAG 1032 0.4215 MASSFDRWEKDPYFTAAEEVQESADRMESTYRTWTRAKKDTSSKWDSDELLRDLQTALGTAKWQLEEFERAVRSSYGKSSSDDAQNRHRDFIVAIEDKITKVEQSLQESIVADGKASLPWVRLNEGERNELALFLSGIPADDGNSPTKSNGRDSENQQLRDKDSVSISKKLLLSSEWNSLEVKEENSHGHRRTASASADIGSWKIAVSDDMQQYNSSNGPFGPMHKVPSLSGFISSMESVSKMKWPKNAFRKLKALDNHQGADSALLPSAELNRGINACYERSKSYLDSCDECYDKQLYGWYGAIQRQLQRSQYQMQYSRPVQITVWIVLLLCLIVLIAFRAM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0398 343 PANTHER OS05G0443700 PROTEIN 1 335 - -
Glsi10g0398 343 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Glsi10g0398 343 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Glsi10g0398 343 CDD SNARE_NTD_STX6-like 11 106 - -
Glsi10g0398 343 Coils Coil 51 71 - -
Glsi10g0398 343 MobiDBLite consensus disorder prediction 136 163 - -
Glsi10g0398 343 FunFam Syntaxin 10 8 109 - -
Glsi10g0398 343 Gene3D - 9 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0398 Glsi-ChrGlsi10 2586127 2588447 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0398 10 2586127 2588447 Glsi10g0398 10 2586127 2588447 ECH