Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0372 ATGGGCATGGGCCACGCTGCTTCCACGGCCGCAATCCCTTGCCCTAGCCAAACCAATCCCACCCACCGCTCTAATTCCACATCGACGTCCGTCGTTTCTCCCATGCTTCCCAACCACAACCACGAGCCCCCTCCCGACCTCATCATCCCTGACTACATCTCTGATCTTCCCGACGAGTGCTTGGCTATCATTTTCCAGTCACTTACCTCCTCCGACCGCAACCGCTGCTCCCTTGTATGCCGGCGTTGGCTCCAGATCGAGGGACGGAGTCGTCACCGTCTCTCCCTCAACGCTCAATCAGATCTTCTCTTGGTTATCCCTTCTCTTTTGTCTCGTTTCGATTCAGTCACGAAACTCGCTTTGAAATGCGACCGCAGATCCTTAAGCATTGGAGACGAAGTGCTTACCCTCATCTCTCAACGATGCCCCAATCTGACTCGCCTGAAACTCCGTGCCTGCCGTCAACTTACGGATACTGGCATGGAGGCCTTTGCCAAGAATTGCAAGGGTTTGAAGAAACTTTCCTGTGCATCTTGCACTTTCGGAGCCAAAGGGATGAACGCTGTGCTCCATTATTGTGGGGCTATGGAAGAACTATCTGTGAAGCGTCTCCGGGGAATTGCCGATGGAGCTGCGGCCGAGCCCATTGGACCCGGTGTTTTAGCGTCATCTCTCAAAACAATTTGCTTAAAGGAGCTATTTAATGGTCCATGTTTCGGGTCACTTATTCTTGGCGCGAAGAATCTAAGGACTTTGAAGATTTTCAGGTGCCGTGGCGATTGGGATAAACTTTTTCAACTCCTAGCTGATCAAGTACCAAGTTTGGTCGAAGTCCACCTTGATAGGCTCCGTATTAGCGATATTGGCTTGGCGGCAATCTCGAATTGTACGAGTTTGGAAGTTTTGCATCTGGTCAAGACCCCGCAGTGCACAGATTTAGGACTCGTCGCAATTGCAGAACGACGTAAGCTCTTACGGAAACTACATATTGACGGATGGAAGGCGAGCCGTATAGGCGATGAAGGTATAATAGCAGTTGCTAAATGTTGCCCTTTTCTTCAGGAACTGGTCCTTATTGGTGTCAATCCCACTAAAGCGAGTTTGGAAATGTTGGCATGCAATTGCCAGAATCTAGAGCGATTAGCGTTATGTAGAAGTGATACAGTTGGTGATGCTGAGATATCGTGCATTGCAGCGAAATGTATAGCATTGAAAAAGCTTTGTATTAAGAGTTGCCCTGTCTCTGATCATGGTATGGAAGCGCTCGCAGCCGGGTGCCCGAATTTGGTGAAAGTGAAGGTTAGGAAGTGTAAGGGTGTGACCTCTGAGGGTGCAGATTGGTTGAGGTTAAGAAGGGGATCACTTATTGTTAATTTAGATGCTGGCGAAACAGAACATCAGGACGCAAGTGCATGTGATGGGGTAGCCCAAGATAACGGCCTAGAATTTCCTTCAATCCCCAGCCAAACAGCAACGTCAGCCACCATTGCATCAAGCAGAGCTGGTCGATCAACTTCATTCAAATCAAGGTTAGGACTTTTGTCCGGGAAGAGTTTAATGGCTTGCACTTTGAGAAGGTGGTCAGGTGGTAACGGTGGTTCCCGGCATGCTTAG 1614 0.4932 MGMGHAASTAAIPCPSQTNPTHRSNSTSTSVVSPMLPNHNHEPPPDLIIPDYISDLPDECLAIIFQSLTSSDRNRCSLVCRRWLQIEGRSRHRLSLNAQSDLLLVIPSLLSRFDSVTKLALKCDRRSLSIGDEVLTLISQRCPNLTRLKLRACRQLTDTGMEAFAKNCKGLKKLSCASCTFGAKGMNAVLHYCGAMEELSVKRLRGIADGAAAEPIGPGVLASSLKTICLKELFNGPCFGSLILGAKNLRTLKIFRCRGDWDKLFQLLADQVPSLVEVHLDRLRISDIGLAAISNCTSLEVLHLVKTPQCTDLGLVAIAERRKLLRKLHIDGWKASRIGDEGIIAVAKCCPFLQELVLIGVNPTKASLEMLACNCQNLERLALCRSDTVGDAEISCIAAKCIALKKLCIKSCPVSDHGMEALAAGCPNLVKVKVRKCKGVTSEGADWLRLRRGSLIVNLDAGETEHQDASACDGVAQDNGLEFPSIPSQTATSATIASSRAGRSTSFKSRLGLLSGKSLMACTLRRWSGGNGGSRHA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0372 537 MobiDBLite consensus disorder prediction 11 36 - -
Glsi10g0372 537 Pfam F-box domain 53 86 IPR001810 GO:0005515
Glsi10g0372 537 Gene3D Ribonuclease Inhibitor 106 214 IPR032675 -
Glsi10g0372 537 FunFam F-box/LRR-repeat protein 4 53 91 - -
Glsi10g0372 537 SMART fbox_2 56 96 IPR001810 GO:0005515
Glsi10g0372 537 SUPERFAMILY F-box domain 43 86 IPR036047 GO:0005515
Glsi10g0372 537 CDD F-box_AtTIR1-like 53 91 - -
Glsi10g0372 537 FunFam F-box protein SKIP2 88 469 - -
Glsi10g0372 537 PANTHER UNCHARACTERIZED 54 460 - -
Glsi10g0372 537 MobiDBLite consensus disorder prediction 1 44 - -
Glsi10g0372 537 SMART LRR_CC_2 322 349 IPR006553 -
Glsi10g0372 537 SMART LRR_CC_2 401 425 IPR006553 -
Glsi10g0372 537 SMART LRR_CC_2 296 321 IPR006553 -
Glsi10g0372 537 SMART LRR_CC_2 375 400 IPR006553 -
Glsi10g0372 537 SMART LRR_CC_2 168 192 IPR006553 -
Glsi10g0372 537 SMART LRR_CC_2 142 167 IPR006553 -
Glsi10g0372 537 Pfam Leucine Rich repeat 142 165 IPR001611 GO:0005515
Glsi10g0372 537 ProSiteProfiles F-box domain profile. 50 86 IPR001810 GO:0005515
Glsi10g0372 537 SUPERFAMILY RNI-like 95 456 - -
Glsi10g0372 537 Gene3D Ribonuclease Inhibitor 217 483 IPR032675 -
Glsi10g0372 537 Gene3D - 52 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0372 Glsi-ChrGlsi10 2429278 2430891 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0372 10 2429278 2430891 Glsi10g0372 10 2429278 2430891 ECH