Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0371 ATGGACTATCTTGGGATTGATCTGAGCTGTGCTGTGGGATCTCTACGCCATGGCGAGTTCCCTGACAAGGACTGTCTCCTACCTCTCATTTCCAAATTCCTTGGCTATGCCATCGTCGCTGCTTCCACCACCGTCAAACTCCCCCAGATCTTAAAAATTTTGAAACACAAAAGCGTGAGAGGCCTTAGCATGATATCCTTTGAGCTTGAAGTTGTCGGCTATACCATTGCACTAGCTTACTGTCTTCACAAAGGGCTTCCATTTTCAGCTTATGGGGAACTATTTTTTCTGTTAATCCAAGCTATAGTTTTGGTTGCTATAATCTACTATTATTCTCAACCTTTGGGTACCAAAACATGGATTCGGGCATTACTATATTGTGCTCTCACACCCACTATTTTAGCTGGTCAAATTGAACCTCTCCTCTTTGAAGCTCTGTATGCTTCCCAGCATGCAATTTTTCTCTTTGCCAGGGTCCCACAAATATGGAAAAACTTTTATAATAAAAGTACAGGGGAGCTCAGCTTTTTGACATGTTTCATGAATTTTGGAGGTTCAATGGTTAGAGTATTCACCAGCATTCAAGAAAATGCACCAAAAAACGTCATAATGGGCTCTGTAATTGGTGTTGTAACAAATTTCACCATCTTGAGTCAGATAGTAATGTACCAAAGGCCTCGGGCTGGTAAAGAGAAGAAAATGAAGTAG 708 0.4138 MDYLGIDLSCAVGSLRHGEFPDKDCLLPLISKFLGYAIVAASTTVKLPQILKILKHKSVRGLSMISFELEVVGYTIALAYCLHKGLPFSAYGELFFLLIQAIVLVAIIYYYSQPLGTKTWIRALLYCALTPTILAGQIEPLLFEALYASQHAIFLFARVPQIWKNFYNKSTGELSFLTCFMNFGGSMVRVFTSIQENAPKNVIMGSVIGVVTNFTILSQIVMYQRPRAGKEKKMK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0371 235 Pfam PQ loop repeat 30 89 IPR006603 -
Glsi10g0371 235 Pfam PQ loop repeat 151 200 IPR006603 -
Glsi10g0371 235 Gene3D - 28 113 - -
Glsi10g0371 235 SMART ctns 156 187 IPR006603 -
Glsi10g0371 235 SMART ctns 44 75 IPR006603 -
Glsi10g0371 235 Gene3D - 150 234 - -
Glsi10g0371 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 6 233 IPR016817 -
Glsi10g0371 235 PIRSF Mpdu1 6 235 IPR016817 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0371 Glsi-ChrGlsi10 2422416 2426759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0371 1 224 Miscellaneous Gene Families AT4G07390 76.339 2.77e-130 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0371 10 2422416 2426759 Glsi10g0371 10 2422416 2426759 ECH