Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0344 ATGGACGCCGCCGATCCCGGATGCGATGGTCCTGCTATCAAATCCCTCGGTTCTCTCTTCAAGCTCACCGAAGTCTTCCTCCGTGATGGTGGGGCGCAGGTTTCATCCTCAGCTGAACGCTCTAAATCGGCTGAAGTTGATGATAATAACGGCTTACACTTCGTTGCTGCTACTGAAGATATGGAATTTACGAGACAGATGAGTGCATTGGGTCTCCCTCTTTCCTTTCACACAAATAAGGAGAGAAATGGACTAATAAAAGGCAAAAGAAAGGGTACACGATTGATGCATCCACGTGGTTATCACAATCTTTCAGACGAAGCTTTATCCAGAGTGAGTGCGGAGGAGGTTGTTTCTCCTGCTAATTTTCATGATAATACGAGCAATTGTTTATCTTGTATATCAATGCTGGGCCAAAGTGAATCATGTCACTGTGATGTTGCAGTCGGCGTTGATATGTCCCAATGTGCCTCTGGTGAAGGAGATAATTCAACAAGTTATAGTGGGGTTGCTTATGGTGCTTTGAGGGAGCAAAATGATGATGATATAAATGAGGCAGCTATTGATGATGCCCACGATGGTGACTTATTAATCAGCAATATATTTTTAAGTGATGATTTGAAAATTGCATCAAGTCCACCTACTGGAGCTTCTGATGGAAGTGGGAGCAATTTGACAGGTGCTGGTGTCAACCATTGTGGGATAGAAAATGGTGAAAAATTGATTGATAATGAATGTTTGGAAGTTTCTTCAATTATTTGCAAAGACACAGAACATGAGACCATTTGCAATGATGACGTTGATGCCACTTGGCAGCCAAGGGCTCATGAATCAGATTCATTTCCTAAGAGTTCAGAATGGATTGGATGCAACACAATTGCTGACTCAATTGACTCTGGTGAACTTGGAGAATGGATGGTTTGTTGGGATTCTTTCTATATGAGAAACTACTTCTATAATATCAGAACACAGACTTCTACGTGGCACCCACCCCCATGGATGGAGCATCTTGCAATTGGTGGTTATACAGAAATGGATGATAGTGGTGCCATAAAGGCAACAGAGGAGCATGGTTCACAGAACAAGACTAACCCACTTGAGGAAACCTTGATTAAAGAGAAATTAGCTGGACAACCACATGATGAGTGTTCTGCTGAGATTGCATTTGCTGCTGACAATATGGTATCTGATATTAATGTTCAGTGTGAAGGCCAATCCCTTGACCATTCAGATGCACTTATTGAGAGGAGTGGTTGCAATGATGGAGTTTCATTTTGCTCAATAACAGATACTGTGGAGCATATCATCAGCTCTCATGAAAGATGCATCAAAGCAACTTCAGAGGGTCATGGTACAAATTTGGATACTGTGGTTCCTGTTGTGACTGGGTCGCCTACTGAGTCTGATCCTTCCATGAAAAGACAGGAATTGAAAGTGAAAAGAAACCGAAGACAGAGAAGATTGTATAATGAAGCTAAAGGTCAGTTTAAAGAAATGTATGAAGAGTTTTCTGCTACTATTGGCAAATATTGGTGTCAGAGGTATATTTTATTCTCGAAATTTGATCATGGTATAAAAATGGATGAGGAAGGATGGTTTTCTGTCACTCCAGAGCCTATTGCTCGGCATCATGCATTTCGTTGTGCTAGTGGTATCATAGTTGACTGTTTCACTGGTGTTGGTGGGAATGCCATCCAATTTGCACAATGGTGCAGACATGTAATTGCAATTGATATTGATCCAAGGAAGATTGATTATGCAAGGCATAATGCTGCTATCTATGGGGTGGATGATCGAATTGACTTCATAATGGGAGACTTTTTCCTTTTGGCACCGAAGTTTAAGGCTGATACTGTTTTCTTATCTCCTCCTTGGGGGGGACCTGATTATGCTAAGGTTATGACTTATGACTTGAAGACAATGCTTAAACCGCATGATGGATATTTTCTGTTCAGTGTTGCCAAGGAAATTGCTTCCAGAGTTGTCATGTTCCTGCCAAGAAATATCAACCTGAACCAATTGGCAGAATTATCTCTATCTGCTTGTCCACCATGGTCACTGGAGGTGGAGAAAATCTTTTTAAATGGAAAACTGAAGGCAATTACTGCTTACTTCAGTGATACAGCAGTTGGAGGGTGCTGA 2142 0.4155 MDAADPGCDGPAIKSLGSLFKLTEVFLRDGGAQVSSSAERSKSAEVDDNNGLHFVAATEDMEFTRQMSALGLPLSFHTNKERNGLIKGKRKGTRLMHPRGYHNLSDEALSRVSAEEVVSPANFHDNTSNCLSCISMLGQSESCHCDVAVGVDMSQCASGEGDNSTSYSGVAYGALREQNDDDINEAAIDDAHDGDLLISNIFLSDDLKIASSPPTGASDGSGSNLTGAGVNHCGIENGEKLIDNECLEVSSIICKDTEHETICNDDVDATWQPRAHESDSFPKSSEWIGCNTIADSIDSGELGEWMVCWDSFYMRNYFYNIRTQTSTWHPPPWMEHLAIGGYTEMDDSGAIKATEEHGSQNKTNPLEETLIKEKLAGQPHDECSAEIAFAADNMVSDINVQCEGQSLDHSDALIERSGCNDGVSFCSITDTVEHIISSHERCIKATSEGHGTNLDTVVPVVTGSPTESDPSMKRQELKVKRNRRQRRLYNEAKGQFKEMYEEFSATIGKYWCQRYILFSKFDHGIKMDEEGWFSVTPEPIARHHAFRCASGIIVDCFTGVGGNAIQFAQWCRHVIAIDIDPRKIDYARHNAAIYGVDDRIDFIMGDFFLLAPKFKADTVFLSPPWGGPDYAKVMTYDLKTMLKPHDGYFLFSVAKEIASRVVMFLPRNINLNQLAELSLSACPPWSLEVEKIFLNGKLKAITAYFSDTAVGGC 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0344 713 Gene3D Vaccinia Virus protein VP39 501 710 IPR029063 -
Glsi10g0344 713 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 57 709 - -
Glsi10g0344 713 Pfam RNA cap guanine-N2 methyltransferase 552 706 IPR019012 GO:0001510|GO:0008168|GO:0009452
Glsi10g0344 713 ProSitePatterns WW/rsp5/WWP domain signature. 305 331 IPR001202 GO:0005515
Glsi10g0344 713 CDD WW 305 333 IPR001202 GO:0005515
Glsi10g0344 713 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 502 709 - -
Glsi10g0344 713 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 491 653 IPR029063 -
Glsi10g0344 713 CDD AdoMet_MTases 553 655 - -
Glsi10g0344 713 ProSiteProfiles WW/rsp5/WWP domain profile. 305 333 IPR001202 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0344 Glsi-ChrGlsi10 2245318 2252382 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0344 10 2245318 2252382 Glsi10g0344 10 2245318 2252382 ECH