Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi10g0327 ATGGTTTTATGTTGCTTCCACAAGCAACTTGGGTGTTTTTGTTCTCACATTTCAGAGGGGATTCTCGGGATAGAAGTTAAGATATTTGTCCCATTGGTCTCTGATGTTGTCCGGTTGTCCCCATTCTCAGTTAGTCGAATCGCAGCAGGACGACGTGCGGGCGAAAATATGATAGTTTACCGCTCTCTTCGCGAGAGCATATTGTCCCCGTTCGAGGCAATTCTGCTATTTGCTCAAGGGATGGAAACTTCGGGTCTTCCAAAGACGGTGAAGACCGCACCATCTAAAGCTCTAGTTATCAGAATCAATTTGGTTTTCCTTGCCTTCTTTCTGATTGTTTATGCAACCTTCCTTCTTCGGCCATCTTCTTCAATCTACTTCGAGAATGCAGCCTCCCTCGTCAGGTGCTCCTTGCGCGAATGCCATCACAAGGCAGAAAAAAGCATCAAAATGAAAGCAGACTTGGAGGAGCGTCAAGCCAATTCAGGGAGGCCAAAGGGTATAGTGAGTAAGATAGAGGTACCTAGCTTCATCGGTGAAATGGGGAAAGGGATGAAGATTGGAATGGTAAACATGGATGGAGATGACGTGGGTGAATGGAGGTCATACGGAGAAACAATGCATGTTTATTTTGATAGGGTATCACAGTTTTTCAATTGGACGGATTTGTTTCCAGAATGGATAGACGAGGAGGAAGAAAGTGACGTTCCATCGTGCCCGGAGATACCTATGCCAGAGTTTGCAGTATACGAAAGGATGGACGTGATCGTGGCTAGACTTCCATGTAAGCATCCCGAAGAGGGGTGGGGAAGGGACGTGTTTCGGTTGCAAGTCCATCTGATAGTGGCAAATCTGGCCGTGAAGAAAGGGAAGAAGGATTGGAGTTGGAAGACAAAAGTGGTTTTCTTGAGCAAGTGTAGACCTATGCTGGAGCTGTTTCGATGTGATGACTTGGTCAGGCGGGAAGGTGACTGGTGGTATTATGAGCCTGACCTGAAGAGGTTGGACCAGAAAACTTCGTTGCCCATTGGATCCTGCAGGTTGGCTTTGCCTCTCTGGGAACAAGGAATTGACGAGGTATATGACTTGTCCAAGATTCGGAAAAGCGTGGCAAGCAGAAAGAGGGTAAAACGCGAAGCCTACGCCACCGTCCTCCACTCTTCTGAATCCTATGTATGTGGTGCAATAACCCTCGCACAGAGCCTCCTTCAAACCGGCACCAAACGCGACCTTATCCTCCTCATAGACAACTCAATCTCCTCACCCAAACGCCAGGCTCTCTCTGATGCGGGTTGGAAGATCCGAATCATCACCCGGATTCGGAATCCCAAAGCAGAGAAGGGCACTTACAATGAGTACAACTACAGCAAGTTCCGGCTATGGCAGCTCACTGACTACGACAAGATCATCTTCATTGACTCGGACATCGTCGTTCTGCGGAGCCTGGACATCCTCTTCCATTTCCCTCAAATGTCGGCCACCGGCAACGACCAATCGATCTTCAACTCGGGCATCATGGTGATCGAACCTTCCAACTGTACGTTCCGTATATTAATGGACCACCGGGAAGACATCATATCGTACAATGGCGGAGACCAAGGGTTTCTGAACGAGGTATTCGTGTGGTGGCACAGGTTGCCGAGGAGGGTGAATTACCTGAAGAATTTCTGGGCGAATACGACGTTAGAGGCGAGTGTGAAGAATGGGCTATTCGGGGCAGAGCCGCCAAAGTTGTACGCAATTCATTATCTGGGGTTGAAGCCATGGCTTTGTTATAGGGACTACGATTGCAATTGGGATGTGGAGGATCAGCATGTTTATGCCAGTGACGTGGCACACCACAGGTGGTGGAAGCTTTATGACGGAATGGAGGAGAGGCTGCAGAGATTCTGTAGGCTAACAAAACGACGTAGGACTGAGCTGAATTGGGAAAAGAGGAAGGCTAGAAAGAAGGGATTCGCGGATGGGCATTGGAAAATCAATATTACAGATCCTAGACGATCTGGCTCTCTTTTGATGGATTAG 2025 0.4835 MVLCCFHKQLGCFCSHISEGILGIEVKIFVPLVSDVVRLSPFSVSRIAAGRRAGENMIVYRSLRESILSPFEAILLFAQGMETSGLPKTVKTAPSKALVIRINLVFLAFFLIVYATFLLRPSSSIYFENAASLVRCSLRECHHKAEKSIKMKADLEERQANSGRPKGIVSKIEVPSFIGEMGKGMKIGMVNMDGDDVGEWRSYGETMHVYFDRVSQFFNWTDLFPEWIDEEEESDVPSCPEIPMPEFAVYERMDVIVARLPCKHPEEGWGRDVFRLQVHLIVANLAVKKGKKDWSWKTKVVFLSKCRPMLELFRCDDLVRREGDWWYYEPDLKRLDQKTSLPIGSCRLALPLWEQGIDEVYDLSKIRKSVASRKRVKREAYATVLHSSESYVCGAITLAQSLLQTGTKRDLILLIDNSISSPKRQALSDAGWKIRIITRIRNPKAEKGTYNEYNYSKFRLWQLTDYDKIIFIDSDIVVLRSLDILFHFPQMSATGNDQSIFNSGIMVIEPSNCTFRILMDHREDIISYNGGDQGFLNEVFVWWHRLPRRVNYLKNFWANTTLEASVKNGLFGAEPPKLYAIHYLGLKPWLCYRDYDCNWDVEDQHVYASDVAHHRWWKLYDGMEERLQRFCRLTKRRRTELNWEKRKARKKGFADGHWKINITDPRRSGSLLMD 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi10g0327 674 Pfam Glycosyl transferase family 8 384 488 IPR002495 GO:0016757
Glsi10g0327 674 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 377 626 IPR029044 -
Glsi10g0327 674 FunFam Hexosyltransferase 376 627 - -
Glsi10g0327 674 PANTHER GLYCOGENIN SUBFAMILY MEMBER 269 668 - -
Glsi10g0327 674 SUPERFAMILY Nucleotide-diphospho-sugar transferases 380 628 IPR029044 -
Glsi10g0327 674 CDD GT8_Glycogenin 379 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi10g0327 Glsi-ChrGlsi10 2134340 2138032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi10g0327 170 673 Glycosyltransferase AT4G33330 69.352 0.0 758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0327 10 2134340 2138032 Glsi10g0327 10 2134340 2138032 ECH