Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g2074 ATGGATAGCCATAGGTGGAAAGAGCACAATGAGAATAACGTTTACTTTTTGTCTGATTATGATGTCGCTTTAGATCGATGCGTACCCAATATAGAGCATAGCCCTCCCATGTCTTCCTCTCCATCGATTCTGCCCAATTCATCTCCTCCCAGGGTTGGCTACATCGAACACCCTGTTTCAAAATTGGACACTCTTGCTGGAATCGCTATCAAGTACGGTGTTGAGGTGTCAGACATAAAAAAAATGAACGGCCTTGTTACAGATCTCCAGATGTTTGCGCTCAAGACTCTCCACATCCCGCTACCTGGAAGACACCCTCCATCGGATGGTTCCACTACTACAGGACTCGGTAGCTCTGGCCACAGTCCACCTGATCAAGGACAAGATGAATCGCGTCAGAAATCTGAAGTGGACTTTGCTACACCAGAGTTGCTCTTGGGGGAGGATAATAGCAGTGGTGGGTATTCTTCAAGAACAGGAAAAGGGTTAGCTCAGAGACAGAAGGCAACAAGCCGAATTACATTGACAACTGGTTCTGAAGTATGTGGCTTAAATCATGTGCCAATACGTTTGGAGGATGCTTTTCTAACTGATGGTCCATCTGGTGTGAAGAAATCATCAAGCACGTCATGTTTACAAGATCAGGATAACTGCAGCTCCTCATCCATCTGGCCAACCTCAAGATGGAGTTTGAAACCAGATTTACAGGCCTTTCCAACTGCAGCCATTGCAAAACCAATGTTTGATGGCTTGCCCAAGCCAATAACTGGTAGGAAAAACAAAGCTGCACTTGATTAA 798 0.4549 MDSHRWKEHNENNVYFLSDYDVALDRCVPNIEHSPPMSSSPSILPNSSPPRVGYIEHPVSKLDTLAGIAIKYGVEVSDIKKMNGLVTDLQMFALKTLHIPLPGRHPPSDGSTTTGLGSSGHSPPDQGQDESRQKSEVDFATPELLLGEDNSSGGYSSRTGKGLAQRQKATSRITLTTGSEVCGLNHVPIRLEDAFLTDGPSGVKKSSSTSCLQDQDNCSSSSIWPTSRWSLKPDLQAFPTAAIAKPMFDGLPKPITGRKNKAALD 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g2074 265 Pfam LysM domain 59 100 IPR018392 -
Glsi09g2074 265 ProSiteProfiles LysM domain profile. 55 99 IPR018392 -
Glsi09g2074 265 SUPERFAMILY LysM domain 55 100 IPR036779 -
Glsi09g2074 265 Gene3D LysM domain 43 109 IPR036779 -
Glsi09g2074 265 MobiDBLite consensus disorder prediction 107 126 - -
Glsi09g2074 265 CDD LysM 63 99 IPR018392 -
Glsi09g2074 265 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 37 114 IPR045030 -
Glsi09g2074 265 MobiDBLite consensus disorder prediction 150 168 - -
Glsi09g2074 265 MobiDBLite consensus disorder prediction 100 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g2074 Glsi-ChrGlsi09 44220794 44224290 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g2074 09 44220794 44224290 Glsi09g2074 09 44220794 44224290 ECH