Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1977 ATGGCAATGCCATCGGGAAATGTGGTGATGCCGGACAAAATGCAGTTTCCAAATGGTGGCGGTGGTGGGACTGGCAGTGGAGGTAGTGAGACTTACCAGCACCACTACCGCCAACAATGGTTTATGGATGAGCGGGATGGGTTTATCAATTGGCTGCGCAGCGAATTCGCTGCTGCAAATGCAATCATAGATTCTCTTTGTCATCATTTACGCGCAATTGGTGAACCCGGTGAGTATGATATGGTCATTGGGACCATTCAGCAAAGGCGGTGTAATTGGAGTCAGGTGCTTCTTATGCAGCAATACTTTTCTGTGGCGGAAGTGATATATGCACTGCAGCAAGTGGCATGGAGGAGGCAACCGAGGTATCTGGATCAGGTGAAAGTGGGTGGCAAGGAATTTAAGAAATCTGGTTCTGGATTTAAGCAAGGACAGAGATTTGAGGCAGCAAAGGAAGGTCATAATTCCAATGTAGAATCTTTTAGTCATGAAGGCAATGCCGTGGTTACTGGAGGCGCAGAGAAAGGGGCTCCACTAACTGACAAACAAGAGGAACATAAATCAGGTGGCAAGGATGGAAAGATGGATGATAAGAGTTTAGCATCTGCTGAGGAGAAGAAAGATGCTATGACAAAGCTCCAAACTGAGGGCAGCTTGAAGAGCTCAGGGAATTCTCAGGGATCTCTGTCTAACTTGGAATCTGAAGCTGTGGTTGTAAATGATGGAGTTATATCAAATTCTAAAGAGGATGATTCACATTCTATGCACAATCAACATCAGAACCAGAACATTTCTACCATAGCAAAAACTTTTGTTGGCAATGAGCTGTTTGATGGGAAGACGGTGAATGTGGTTGATGGACTGAAGTTGTATGAAGATTTATTTGATGACACTGAAGTCTTGAAACTTGTTTCACTGGTAAATGATCTTAAGGCTGCTGGAAAAAGAGGACAATTTCAAGGAAGTCAAACATACGTGGTTTCAAAAAGGCCTATGAAAGGGCATGGAAGGGAGATGATTCAGTTGGGTGTCCCCATTGCTGATGCACCACCAGATGGGGAAAATCTGACCGGAGCCTCCAGAGATAAAAAAGTAGAATCTATCCCTCCCTTGTTTCAAGAAATTATTGAGCGCTTGGTAGCCTCACAAACTATGACTGTGAAGCCTGATGCCTGCATTGTGGATTTCTATAATGAGGGTGATCATTCGCAGCCTAACAATTGGCCACCTTGGTTTGGAAGGCCTGTTTATATCCTTTCCCTGACAGAATGTGACATGGCTTTTGGTAGAGTTATTGTCTCAGACCATCCTGGGGATTATAGAGGCACTGTCAAGCTTTCTCTTGTGCCTGGGTCTCTTCTGGTGATGCAAGGAAAATCTGCTGATTTTGCTAGACATGCCATTCCTTCCATTCGCAAACAACGCATACTTGTTACTTTCACAAAGTCCCAACCAAAAAAATCACTGCCTAGTGATGCTCAGCGTCTTGCTTCACCTGCAGCATCTTCTCATTGGGGTCCACCACCCAGCAGATCTCCCAATCATTTACGTCATCATTTAGGCCCCAAGCATTATGCTGCAGTTCCAACAACAGGAGTATTGCCAGCCCCACCCATTCGCCCACAAATTCCACCTCCAAACAGTATGCAGCCATTATTTGTGCCTGCGCCAGTTGCACCTCCCTTGCCATTTCCAGCACCAGTTCCTATCCCACCAGGTTCTACAGGATGGACAGCAGCCCCTCCAAGGCATCCTCCTCCTCGAATCCCTGTTCCTGGCACTGGAGTCTTCCTGCCTCCACCAGGCTCTGGTAGTTCATCTCCACAGTTACCAGGTACCTTGACTGAAATGAACTTGAGTGTGGAGACTGTACCAGAAAAAGAAAATGGGAAGTCTAATTATAACAATACGAGTGCTTTGCCAACAGTAAAATTGGATGGACAGATTCAGAAGGAAGAATGCAATGGAAATGTGGGTGAAACTGAAGGTGAGCAAGCTGTAGAGAAAGAGCAGGAAAGCAATGACAAAGTTGTGGTAAGCCATTGA 2046 0.4565 MAMPSGNVVMPDKMQFPNGGGGGTGSGGSETYQHHYRQQWFMDERDGFINWLRSEFAAANAIIDSLCHHLRAIGEPGEYDMVIGTIQQRRCNWSQVLLMQQYFSVAEVIYALQQVAWRRQPRYLDQVKVGGKEFKKSGSGFKQGQRFEAAKEGHNSNVESFSHEGNAVVTGGAEKGAPLTDKQEEHKSGGKDGKMDDKSLASAEEKKDAMTKLQTEGSLKSSGNSQGSLSNLESEAVVVNDGVISNSKEDDSHSMHNQHQNQNISTIAKTFVGNELFDGKTVNVVDGLKLYEDLFDDTEVLKLVSLVNDLKAAGKRGQFQGSQTYVVSKRPMKGHGREMIQLGVPIADAPPDGENLTGASRDKKVESIPPLFQEIIERLVASQTMTVKPDACIVDFYNEGDHSQPNNWPPWFGRPVYILSLTECDMAFGRVIVSDHPGDYRGTVKLSLVPGSLLVMQGKSADFARHAIPSIRKQRILVTFTKSQPKKSLPSDAQRLASPAASSHWGPPPSRSPNHLRHHLGPKHYAAVPTTGVLPAPPIRPQIPPPNSMQPLFVPAPVAPPLPFPAPVPIPPGSTGWTAAPPRHPPPRIPVPGTGVFLPPPGSGSSSPQLPGTLTEMNLSVETVPEKENGKSNYNNTSALPTVKLDGQIQKEECNGNVGETEGEQAVEKEQESNDKVVVSH 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1977 681 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 39 633 IPR044842 GO:0003729|GO:0006402|GO:0032451
Glsi09g1977 681 MobiDBLite consensus disorder prediction 663 681 - -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 178 213 - -
Glsi09g1977 681 SUPERFAMILY Clavaminate synthase-like 276 480 - -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 482 498 - -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 1 29 - -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 482 520 - -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 214 232 - -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 626 681 - -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 626 644 - -
Glsi09g1977 681 Gene3D - 272 489 IPR037151 -
Glsi09g1977 681 MobiDBLite consensus disorder prediction 169 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1977 Glsi-ChrGlsi09 24673322 24680826 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1977 09 24673322 24680826 Glsi09g1977 09 24673322 24680826 ECH