Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1976 ATGAAGAGTTTGACAAGACAGAGCATTTTGGAATTGCTGAATATTCGTACCAACAAGATCCGCCTCCTTGTGGCTTTCTATTTTGCCGCCGTCACAGACGCCGCTACCGACGGAACTCCGGTGACTGGGCATTTAGTCGAATATTCGAATATGGCAGCGACTTTGCTCTCTCATGCATCGGTTCTTCAACCTAACCGTTCTGTGATTCTTCGAGCCCGGCAGTTTCCTCGCGTAGCTCAGAGTCTCCGAAATCGGCCTTCTTCCTCAAATGTACGTTTTCTGGCCAAAATGGAGAATGGGCTCGCACCGAAAGCTTCGGCCGGTGTTTTGGAATCGAATTTCAACTCGCCCGTTTCAGCTAAAATGAGCAATAGTCCGATTGTTGTCATTGACAACTACGACAGCTTTACCTATAACCTTTGCCAGTATATGGGAGAACTGGGATTTCACTTTGAGGTCTACCGGAATGATGAGTTGACTGTTGAGGAACTAAAGAGGAAAAATCCCAGAGGAGTGCTAATATCACCTGGGCCAGGCACACCTCAAGATTCTGGCATATCTTTGCAAACGGTTTTGGAACTTGGGCCAACTGTACCTTTGTTTGGTGTGTGCATGGGTTTGCAATGCATTGGAGAGGCTTTTGGAGGGAAAATTGTCCGTTCTCCTCTTGGTGTCATGCATGGAAAAAGCTCTTTGGTGTATTATGACGAAAAGGGAGAAGATGGATTATTTTCTGGGTTATCAAATCCTTTCACTGCTGGTAGATATCACAGCCTTGTGATTGAAAAGGAGAGCTTCCCTCATGAAGAACTTGAGGTAACAGCCTGGACAGAGGATGGTCTTATAATGGCTGCCCGTCACAAGAGATATAAGCATCTGCAGGGGGTTCAATTTCATCCAGAGAGCATTATAACTGATGAGGGCAAGGCAATTGTCCGTAATTTTATCAAGCTGATTGAGAAAAAGGAGGCTGGTGGTTCCTGA 984 0.4593 MKSLTRQSILELLNIRTNKIRLLVAFYFAAVTDAATDGTPVTGHLVEYSNMAATLLSHASVLQPNRSVILRARQFPRVAQSLRNRPSSSNVRFLAKMENGLAPKASAGVLESNFNSPVSAKMSNSPIVVIDNYDSFTYNLCQYMGELGFHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLFSGLSNPFTAGRYHSLVIEKESFPHEELEVTAWTEDGLIMAARHKRYKHLQGVQFHPESIITDEGKAIVRNFIKLIEKKEAGGS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1976 327 Gene3D - 125 318 IPR029062 -
Glsi09g1976 327 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 169 183 - -
Glsi09g1976 327 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 199 215 - -
Glsi09g1976 327 PRINTS Glutamine amidotransferase superfamily signature 172 181 - -
Glsi09g1976 327 PRINTS Glutamine amidotransferase superfamily signature 199 210 - -
Glsi09g1976 327 PRINTS Glutamine amidotransferase superfamily signature 295 308 - -
Glsi09g1976 327 PANTHER MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED 119 323 - -
Glsi09g1976 327 CDD GATase1_Anthranilate_Synthase 127 316 IPR006221 -
Glsi09g1976 327 PRINTS Anthranilate synthase component II signature 172 181 - -
Glsi09g1976 327 PRINTS Anthranilate synthase component II signature 295 308 - -
Glsi09g1976 327 PRINTS Anthranilate synthase component II signature 127 141 - -
Glsi09g1976 327 PRINTS Anthranilate synthase component II signature 248 260 - -
Glsi09g1976 327 PRINTS Anthranilate synthase component II signature 225 233 - -
Glsi09g1976 327 PRINTS Anthranilate synthase component II signature 199 210 - -
Glsi09g1976 327 FunFam Anthranilate synthase beta subunit 1 125 318 - -
Glsi09g1976 327 NCBIfam glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 127 317 IPR006221 -
Glsi09g1976 327 SUPERFAMILY Class I glutamine amidotransferase-like 127 321 IPR029062 -
Glsi09g1976 327 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 126 325 - -
Glsi09g1976 327 Pfam Glutamine amidotransferase class-I 128 316 IPR017926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1976 Glsi-ChrGlsi09 24618770 24627230 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1976 09 24618770 24627230 Glsi09g1976 09 24618770 24627230 ECH