Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1906 ATGATCGTGTTTTTAGTGGAAATACCCAACATATGGATGGCAAAATATACTGATGCTGCTAATGGCATTTGCTTCCATGATGAAGATCAAGTGAACTATGTCCATCATAGTAATGCATCAGCGCACATAATATACATGACTTGCACTTTTCTCTTTGTCGAAGCTCTGCCGGACCATATGGATCGACAGGTTGAAGCGGTTTACCATTCTACAGCTACACCAAATTGGACAATCAATGTTTCAGATATAAGAACAGTTAAGGTTAGCAACATATCACTGGCTACTTCAGAGAAGGATATCAGAGAATTCTTTTCATTCCCGGGTGATATTAAATATATTGAGATGCAAAGGGAAAGTGAGAACACCCAGGTTTCATATGTTACCTTTAAGGATTCACAGGGAGCAGACACAGCAGTTCTATTGACGGGTGCTGACATAGCTGATCACTGTGTCAACATTACACCTGTTGAGAACTACCAGCTACCCCCAGAATCTCTCCCATCTAGCCCAAGAAAGCAAACTGCTGCTGCTGTTAAGAAGGCTGAAGATGTAGTGAGTACCATGCTTGCTAAGGGTTTCGTTTTAGGAAAGGATGCAATCAACAGGGCAAAATACTTCGATCAACGTCATCACTTGACCTCAAATGCTTCTGCCACAGTTGCTTCCATTGGTCACAAAATGGGTTTAAGTGATAAACTAAGCATTGGAACAGCTATTGTCAATGAAAAGATGAGAGAGATGGATGAAAAATTTCAGGTTTCCGAAAAGACTAGGTTTGCTTATGCTGTTGCTGGGCAACAAGCAAATAGTGCTGGTTCTGCTATCATGAGCAATTTTTACGTATTAACTGGAGGTTCGTGGGTGGCAAATGCCTTTACTGCTATTGCAAAGGCAGTTGGTCATGTCAGCGTGATGACCAAAGAGAAGGTTGAACAGGCTGAGTTACGAAAGAAGGAAACTTTTTTCAAGGAAAGTGCAGGGATCATTGATGAATTTGGGAAAATGCACTTTGATAGATCTTCAGCCAGGGCTCCTTCAGTAGTTCTTGTTAATTCAGGTGATGATAGTGAGCTGGAAATTATATGA 1086 0.4116 MIVFLVEIPNIWMAKYTDAANGICFHDEDQVNYVHHSNASAHIIYMTCTFLFVEALPDHMDRQVEAVYHSTATPNWTINVSDIRTVKVSNISLATSEKDIREFFSFPGDIKYIEMQRESENTQVSYVTFKDSQGADTAVLLTGADIADHCVNITPVENYQLPPESLPSSPRKQTAAAVKKAEDVVSTMLAKGFVLGKDAINRAKYFDQRHHLTSNASATVASIGHKMGLSDKLSIGTAIVNEKMREMDEKFQVSEKTRFAYAVAGQQANSAGSAIMSNFYVLTGGSWVANAFTAIAKAVGHVSVMTKEKVEQAELRKKETFFKESAGIIDEFGKMHFDRSSARAPSVVLVNSGDDSELEII 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1906 361 Gene3D - 80 154 IPR012677 -
Glsi09g1906 361 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 84 158 IPR000504 GO:0003723
Glsi09g1906 361 SUPERFAMILY RNA-binding domain, RBD 72 159 IPR035979 GO:0003676
Glsi09g1906 361 SMART rrm1_1 85 154 IPR000504 GO:0003723
Glsi09g1906 361 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 83 317 - -
Glsi09g1906 361 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 87 150 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1906 Glsi-ChrGlsi09 21394951 21399232 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1906 09 21394951 21399232 Glsi09g1906 09 21394951 21399232 ECH