Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1872 ATGCCTGCAACCTATCTTGGAATAAGGGTGGACAATGAGATCATGTGTTCTGAAACTTGCTGCCATGTGTTTGCAGGAAAGGCCAAGAGTTGGAATTTTAGGATGGGCAGAACAATTGAGTTATATGGATTCCCTTCTGGTGTGTCGGCGTCCAACGTAAAGGCATTTGTAGAGCAGTATACTGGTGAAGGAACTATCTATGCTTTTAAGTTAAGGCTAGGCAAAGGTCGGAAACCAAGAGCATATGCTATTATTCAGTTCAACACCCCAAAAGATGCTTCTTGTATCATCTCCTTAGTTGACAATAGACTAAGGTTTGGATGTTCCTACCTGAAGGCTCGGGAACTCGAAAAAGATATTGTGTCAAAGCCAAAAACTTTTTTGCATGGCTTGGAGGATGTGAAACTATATTTTGGATGTCAGATCTCAAAGGAAAGATTTTGTTTTTTATGGGAAAAGATGAATGTCAGGGTAAATTTTGGGACTAGAACGAGAAAGTTACATTTCTTTCTGTCCCATGAAGAGGTGCAATATAAACTTGAGCTTTTATATGAGAACATTTGGCAGATTGAGCTGCATCGACCAAGGGATGGAGTTGAAAAGTATCTTCTGATTCAGTTACTTGGTACTCCTCGGATTTTTGAACAAGATGCACGTTCTTCAGGAAATGTATTTGAAGATCCTCTTCTCAACTATTTTAAAGATATCCCTGATGATCAATGGATCCGGGCAATAAATTTCACTCCTTTCTGCTGTATTGGGCAGTCTTCTGCTCTATGTTTAGAGCTTCCTAATGATCAACCTCTTCCAAATTTCAGAGAAAACTTTGCTTATTATAAGGAAAGTGAGAGAAAATACACTTTAGAGAGAGGACTTCCTTTTTCTAGCAATTTGGATCTAGTCCCCATAGTGGCTCCTCCACAAGGCATTGAAATACCATATGAGATCCTTTTTAAAGTTAACTCGTTGCTTCAGCATGGTTGTCTTGCAGGTCCAGCACTCGATATTGGCTTCTATCATTTGGTTGATCCACATAGAACGAATCTTGCTTTTATTGGACATGCTTTAGAGAAAATGTATCATTTAAAGGAATTCTGCTATGACCCCACAAAGTGGCTGACTGACCAGTATAGAAAGTACATTTCATCACAGCACCATCCTCAGTCAGCTGCCATATCATTAGATACTGGGTTGGTATATGTACGCAGGGTTCAGATTACACCTTCTAAAGTGTATTTCTCTGGTCCGAAGGTGAATGTCTCAAATCGTGTCCTCCGCCATTTCCATGAATTCATTGATAATTTTTTACGTGTTTCATTTGTCGATGAGGAGTTGGATAAACTGTTTTCAACAGATTTATCTCCACGTACATCTTCTTCAATTGGGGACATGAAAACTGGAATTTACACAAGAATTCTTTCTATTCTTAGAAATGGCATAATTATTGGTGATAAGAGGTTTGAATTTTTAGCGTTTTCATCGAGTCAATTGCGGGAAAATTCTTTATGGATGTTTGCTCCTACAAGAACTGGACTTACTGCTGCTGCCATAAGAGAATGGATGGGAGATTTTCACAAGATTAGAAATGTAGCTAAATATGCTGCTAGACTGGGACAATCTTTTGGTTCATCCACGGAAACTTTAAGTGTTGGCCGGCATGAAATTGAAATTATTCCTGATGTGGAGATTCGATACGGTGAAAGTGACTATATTTTCTCTGATGGAATTGGGAAGATATCTGCAAAATTTGCAAGGAAAGTGGCTGTAAAATGTAACCATAAATCATCCACTCCATCTGCCTTTCAGGTTCGATATGGTGGGTACAAAGGAGTTGTAGCCGTTGACCCAACATCATCAGTGAAATTATCACTGAGGAAGAGCATGCTCAAGTATGAATCAAATGATACAAAACTAGATGTTTTGGCATGTAGTAAATTTCAGCCTTGTTATCTGAATCGGCAGATAATTACTCTCTTATCTACTCTTGGTGTCAAGGATCATGTTTTTGAGAAGAAACAAAAAGAAGCTATAAATCAACTGAACTCTTTACTAACGGATTCATTAAGGGCACAGGAGTTTCTAGACTTGATGTCTCCTGGGGAGATCTCTAATATTCTGAAGGAGATGCTTATTTGCGGCTATAAGCCTGATGCTGAACCATTTCTTTCAATGATGCTGCAAACATTTAGGGCAGCAAAACTGTTGGAATTGCGACTCAAAACTAGAATTTTTGTTCCAAATGGAAGAGCGATGATGGGATGTCTAGATGAAACAAGAACCTTGGAATATGGTCAAGTATTTGTGCAATTTTCTAATAAGAGGTTCCGGCAGCTATCTAATGATTCTGTTGTGTGCGGCTTGGAGAGGTCTTATATAGTTACTGGTAAGGTAGTTGTTGCAAAAAACCCGTGCTTGCACCCAGGAGATGTGCGTGTTTTGAAGGCTGTTAATGTGCCAGCTTTGCACCACATGGTTGATTGCGTTGTTTTCCCTCAAAAAGGATTCAGACCTCATCCAAATGAGTGTTCGGGAAGTGATCTGGATGGAGACATCTACTTTGTTTGTTGGGACCCTGATTTGATTCCACCTAAACAAGTCCCCCCAATGGATTATACTCCTGCCCCCAGTATGCAATTGGATCGTGATGTAATGATTGAGTCAGATGTAATATATATTCCTGGTCTACCAAGAAAAGATTTTAGTTGTTTACCTGATGTTCTAGTCTTGATAAGTGAGGTTGAGGAGTATTTTGCCAACTACATAGTCAATGACAGTCTAGGAATAATTGCCAATGCCCACACTGTCTTTGCAGATAGACAGCCATTAAAAGCAATGGCTGATCCATGTATTGAGCTTGCAAAGTTATTTTCAATAGCGGTCGACTTTCCAAAAACTGGTGTGCCAGCTGTTATACCTCGTCAGCTCTATGTCAAAGAATATCCAGACTGTTGTGGAAATTGA 2961 0.3941 MPATYLGIRVDNEIMCSETCCHVFAGKAKSWNFRMGRTIELYGFPSGVSASNVKAFVEQYTGEGTIYAFKLRLGKGRKPRAYAIIQFNTPKDASCIISLVDNRLRFGCSYLKARELEKDIVSKPKTFLHGLEDVKLYFGCQISKERFCFLWEKMNVRVNFGTRTRKLHFFLSHEEVQYKLELLYENIWQIELHRPRDGVEKYLLIQLLGTPRIFEQDARSSGNVFEDPLLNYFKDIPDDQWIRAINFTPFCCIGQSSALCLELPNDQPLPNFRENFAYYKESERKYTLERGLPFSSNLDLVPIVAPPQGIEIPYEILFKVNSLLQHGCLAGPALDIGFYHLVDPHRTNLAFIGHALEKMYHLKEFCYDPTKWLTDQYRKYISSQHHPQSAAISLDTGLVYVRRVQITPSKVYFSGPKVNVSNRVLRHFHEFIDNFLRVSFVDEELDKLFSTDLSPRTSSSIGDMKTGIYTRILSILRNGIIIGDKRFEFLAFSSSQLRENSLWMFAPTRTGLTAAAIREWMGDFHKIRNVAKYAARLGQSFGSSTETLSVGRHEIEIIPDVEIRYGESDYIFSDGIGKISAKFARKVAVKCNHKSSTPSAFQVRYGGYKGVVAVDPTSSVKLSLRKSMLKYESNDTKLDVLACSKFQPCYLNRQIITLLSTLGVKDHVFEKKQKEAINQLNSLLTDSLRAQEFLDLMSPGEISNILKEMLICGYKPDAEPFLSMMLQTFRAAKLLELRLKTRIFVPNGRAMMGCLDETRTLEYGQVFVQFSNKRFRQLSNDSVVCGLERSYIVTGKVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGFRPHPNECSGSDLDGDIYFVCWDPDLIPPKQVPPMDYTPAPSMQLDRDVMIESDVIYIPGLPRKDFSCLPDVLVLISEVEEYFANYIVNDSLGIIANAHTVFADRQPLKAMADPCIELAKLFSIAVDFPKTGVPAVIPRQLYVKEYPDCCGN 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1872 986 Pfam RNA dependent RNA polymerase 406 982 IPR007855 GO:0003968
Glsi09g1872 986 SUPERFAMILY RNA-binding domain, RBD 35 107 IPR035979 GO:0003676
Glsi09g1872 986 PANTHER RNA-DEPENDENT RNA POLYMERASE 37 982 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1872 Glsi-ChrGlsi09 20404266 20416451 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1872 09 20404266 20416451 Glsi09g1872 09 20404266 20416451 ECH