Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1864 ATGGCGACCATGACGAGCTTGATCGGGCTTATCAATAAGATTCAACGCGCGTGCACTGTTTTAGGCGACCACGGGGGAGAGGGATTGTCTCTCTGGGAGGCTCTTCCCTCGGTGGCTGTGGTCGGAGGCCAGAGTTCTGGCAAATCGTCTGTGTTGGAAAGTGTGGTGGGAAGGGATTTTCTGCCTCGGGGATCTGGTATTGTCACGCGGAGGCCACTAGTGCTGCAACTTCATAAGACTGATGACGGGCAGCAAGAATATGCTGAGTTCCTCCATGCACCAAGAAAGAGATTTACTGACTTTGCTGCTGTCAGGAAGGAAATTGCAGATGAAACAGATCGCATAACTGGGAAGACAAAGCAAATTTCTAATATTCCAATTCACCTCAGCATATATTCTCCAAATGTTGTAAACTTAACCCTCATTGACCTTCCTGGATTGACGAAGGTTGCAATAGAGGGGCAATCAGACACTATAGTTGAAGATATTGAAAACATGGTCCGTTCTTATGTTGAGAAGCCAAACTGCATTATATTGGCTATTTCTCCTGCAAATCAAGATATTGCCACTTCAGATGCCATAAAACTTGCAAAAGAAGTTGATCCCTCTGGAGAAAGAACATTTGGAGTGTTGACAAAACTGGATCTTATGGATAAAGGAACTAATGCCGTTGATGTACTCGAAGGAAGGCAATACAGACTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAATAAAAATGTTGACATGATTATTGCTCGTAAGAAGGAGCGTGAATATTTCGAGACAAGCCCTGAATATGGACATTTGTCTCATAAAATGGGCTCAGAATATCTTGCTAAGCTTCTATCTCAGCATTTGGAGATTGTTATCAGGCAGAAGATACCTAGTATCATTGCCTTAATAAATAAGACCATCGACGAGCTCAATGCAGAGTTGGACCGTATTGGCAGGCCTATCGGTGTAGATTCAGGGGCCCAGCTATACACTATTTTGGAAATGTGTCGTGCATTTGACAAGGTTTTTAGGGAACACCTTGATGGAGGGCGTCCTGGTGGGGACCGAATAAATGGAGTTTTTGACAACCAACTACCGGCTGCTTTAAAAAAGCTCCCCCTTGATCGCCATCTTGCCATGAAAAATGTCCAGAAAGTTGTTACAGAAGCTGATGGGTATCAGCCCCATCTGATTGCTCCAGAGCAAGGGTATAGAAGACTTATTGATTCATCTATCGGCTATTTCAAAGGCCCTGCTGAAGCTTCTGTGGATGCTGTTCACTTCATTCTAAAGGAACTTGTACGGAAGTCAGTTGCAGAAACTGAGGAATTGAAAAGATTTCCAACACTGCAATCTGATATAGCAACTGCTGCTAATGAAGCATTGGAAAGATTTCGAGATGAAAGCAAGAAGACAGTACTACGACTGGTTGATATGGAGTCTAGCTATCTAACGGTGGAATTTTTCCGGAAGATTCATCTTGAACAGGAAAAACCTCCAAATAAGAGTGGCTCAAATGTGGAGAAGGACAATTTTGCTGATAATCACCTCAGGAAGATAGGATCCAATGTTAGTGCCTATATTCAGATGGTTTGTGATACACTTAAGAATTCTATACCAAAGGCTGTGGTTTATTGTCAAGTTAGAGAGGCTAAGAGATCATTGCTTAACCACTTTTATGTTCAAGTTGGGAAGAGGGAGAAGGAGCAATTGGGTGCCATGTTGGATGAAGACCCAGCGCTTATGGAAAAGAGAATACAAATAGCTAAAAGGCTTGAATTATACAAGCAAGCTAGGGATGATATTGATTCCGTGGGTTGGAAATGA 1839 0.429 MATMTSLIGLINKIQRACTVLGDHGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDDGQQEYAEFLHAPRKRFTDFAAVRKEIADETDRITGKTKQISNIPIHLSIYSPNVVNLTLIDLPGLTKVAIEGQSDTIVEDIENMVRSYVEKPNCIILAISPANQDIATSDAIKLAKEVDPSGERTFGVLTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIIARKKEREYFETSPEYGHLSHKMGSEYLAKLLSQHLEIVIRQKIPSIIALINKTIDELNAELDRIGRPIGVDSGAQLYTILEMCRAFDKVFREHLDGGRPGGDRINGVFDNQLPAALKKLPLDRHLAMKNVQKVVTEADGYQPHLIAPEQGYRRLIDSSIGYFKGPAEASVDAVHFILKELVRKSVAETEELKRFPTLQSDIATAANEALERFRDESKKTVLRLVDMESSYLTVEFFRKIHLEQEKPPNKSGSNVEKDNFADNHLRKIGSNVSAYIQMVCDTLKNSIPKAVVYCQVREAKRSLLNHFYVQVGKREKEQLGAMLDEDPALMEKRIQIAKRLELYKQARDDIDSVGWK 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1864 612 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Glsi09g1864 612 Pfam Dynamin family 38 213 IPR045063 -
Glsi09g1864 612 Pfam Dynamin GTPase effector domain 519 609 IPR003130 GO:0003924|GO:0005525
Glsi09g1864 612 Gene3D - 4 310 IPR027417 -
Glsi09g1864 612 Gene3D Dynamin, middle domain 334 589 - -
Glsi09g1864 612 PRINTS Dynamin signature 133 150 IPR022812 -
Glsi09g1864 612 PRINTS Dynamin signature 60 77 IPR022812 -
Glsi09g1864 612 PRINTS Dynamin signature 183 201 IPR022812 -
Glsi09g1864 612 PRINTS Dynamin signature 202 218 IPR022812 -
Glsi09g1864 612 PRINTS Dynamin signature 35 53 IPR022812 -
Glsi09g1864 612 PRINTS Dynamin signature 225 244 IPR022812 -
Glsi09g1864 612 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Glsi09g1864 612 SMART GED_2 516 609 IPR003130 GO:0003924|GO:0005525
Glsi09g1864 612 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Glsi09g1864 612 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Glsi09g1864 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 309 IPR027417 -
Glsi09g1864 612 FunFam dynamin-related protein 1E 4 310 - -
Glsi09g1864 612 FunFam Dynamin-related protein 1C 332 589 - -
Glsi09g1864 612 Pfam Dynamin central region 222 489 IPR000375 -
Glsi09g1864 612 ProSiteProfiles GED domain profile. 521 612 IPR020850 -
Glsi09g1864 612 PANTHER DYNAMIN 6 609 IPR022812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1864 Glsi-ChrGlsi09 20219302 20231407 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1864 09 20219302 20231407 Glsi09g1864 09 20219302 20231407 ECH