Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1858 ATGGCCGATGCCCTCTCCGTGATTCCTGCAGCCGTGCTCCGCAGCCTTGCTGACAAGCTCTACGAGAAGCGCAAGAATGCTGCTCTTGATGTTGAGGGGATAGTGAAGCAGCTCGTTGCCGCCGGGGATCATGATAAAATAACGGCTGTGATCAATTTGTTGACTACGGAATATACTTTTTCGCCCCAAGCAAATCAACGGAAGGGAGGATTGATAGGACTAGCTGCAGCGACTGTTGGGTTGACTACTGAAGCCGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTGTTAAATTCTTTCTCTGATCAAGACAGCAGAGTTCGTTATTATGCTTGCGAAGCACTATATAACATTGCTAAGGTTGTGAGAGGGGATTTTATTATATTCTTTAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCCGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTCCTAGATCGACTTGTGAAGGATATTGTGACTGAAAGCGATCAATTCAGTATTGAAGAATTTATTCCTTTGTTGAGGGAGCGCATGAATGTCCTGAATCCATATGTCCGCCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGTTGAGTGACTCGAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTGTCGGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATTTTGGTTCAGAGGGCAGCTTCTCTGGATGAATTTACTAGATTAACAGCTGTCACGTGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTGGGAGCCATTTTGCCTTGCATATCTGATAAAGAAGAGAAAATCAGAGTGGTTGCTCGTGAAACCAATGAAGAGCTACGAGCAATCAGGGCTGATCCAGCTGAAGCGTTTAATGTAGGAGCAATCTTGTCCATTGCTAGGAGACAACTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTAAACAATTATCGTGCTGAGGTTTTGACATTTCTGAATGATATATTTGACACCCTACTCAAAGCACTTTCAGATCCATCCAATCAGGTTGTGCTTCTGGTTCTTGAAGTTCATGCATGCATTGCAAAAGATCCTCAGCACTTCCGACAGCTTGTTGTTTTCCTAGTGTACAATTTCCGGCTGGATAATTCTCTATTGGAAAAGCGTGGTGCTTTGATAATCCGTCGGCTTTGTGTGCTTTTGAATGCTGAAAGAGTCTACCGTGAACTCTCTACAATACTAGAAGGGGAATCTGATATGGATTTTGCATCAATTATGGTTCAGGCGTTGAATTTGATCTTACTCACATCATCTGAACTATCTGAGCTTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCTGGGAAGGATTTATATGTTTCTTTGTATGCTTCATGGTGCCATTCTCCAATGGCAATTATTAGTCTTTGTTTTTTAGCCCAGACCTACCAACATGCAAGTGCTGTGATTCAATCTCTGGTAGAGGAGGATGTTAACGTTAAATTTTTGGTCCAACTGGATAAGCTGATTCGCTTGTTGGAAACTCCAATCTTTGCTTATCTTAGATTGCAGCTTCTTGAACCTGGAAAGTATATATGGTTATTTAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAGATACTAAAAACTCGCTTAAAAGCTGTGCCATCATATTCTTTCAATGGTGAGCAATTTAAGAGAACATCATCTGGGAATCCCTACCAAATTCTTCATAACATATCCGGTGGATCTCAAATCTCTGAGGATGGTGACATAACTATTGATGGTGGGAAGTCACATAATGAAATCAATTTTGCTGCAAGGCTACAACAGTTTGAGCAAATGCAGCACCAGCATCGCATGCATGCTAAAGCACAAGCACAGTCACGCAATAGTTCCACATCATTGTCAAAGGGTTCACAAAACCAGGAAGAACCAAGGCAATCTCAGTCATCTGACCTTAATGTTCCTCCTTCAAGATCATCATCAAAGAAAGGCCCGGGACAGCTCCAATTATAA 2178 0.4206 MADALSVIPAAVLRSLADKLYEKRKNAALDVEGIVKQLVAAGDHDKITAVINLLTTEYTFSPQANQRKGGLIGLAAATVGLTTEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAASLDEFTRLTAVTWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIRADPAEAFNVGAILSIARRQLSSEWEATRIEALHWISTLLNNYRAEVLTFLNDIFDTLLKALSDPSNQVVLLVLEVHACIAKDPQHFRQLVVFLVYNFRLDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDMDFASIMVQALNLILLTSSELSELRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVEEDVNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGKYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQFKRTSSGNPYQILHNISGGSQISEDGDITIDGGKSHNEINFAARLQQFEQMQHQHRMHAKAQAQSRNSSTSLSKGSQNQEEPRQSQSSDLNVPPSRSSSKKGPGQLQL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1858 725 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Glsi09g1858 725 FunFam protein VAC14 homolog 126 248 - -
Glsi09g1858 725 SUPERFAMILY ARM repeat 5 554 IPR016024 -
Glsi09g1858 725 MobiDBLite consensus disorder prediction 667 725 - -
Glsi09g1858 725 FunFam ARM repeat superfamily protein 6 125 - -
Glsi09g1858 725 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Glsi09g1858 725 MobiDBLite consensus disorder prediction 674 725 - -
Glsi09g1858 725 Gene3D - 1 248 IPR011989 -
Glsi09g1858 725 FunFam protein VAC14 homolog isoform X1 249 410 - -
Glsi09g1858 725 Gene3D - 249 416 IPR011989 -
Glsi09g1858 725 PANTHER TAX1 BINDING PROTEIN-RELATED 7 688 IPR026825 GO:0006661|GO:0070772
Glsi09g1858 725 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1858 Glsi-ChrGlsi09 20059229 20070610 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1858 09 20059229 20070610 Glsi09g1858 09 20059229 20070610 ECH