Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1843 ATGGGTTCTGATGGATCCGGGGTTGTTGTTCCGAGGAGTTTCAGATTATTGGAAGAGCTTGAGAGAGGTGAGAAGGGAATCGGTGATGGAACTGTGAGCTATGGCATGGATGATGCTGATGATATATACATGCAGTCATGGACAGGGACTATTATTGGTCCCCCTGGTACTGTTCATGAAGGGCGTATCTACCAGTTGAAGTTGTTCTGTGGCAAGGATTATCCGGACAATCCCCCATCTGTAAGATTTCAAACAAGGATTAACATGACTTGTGTTAACCAAGAAACCGGAGTGGTTGAGCCGCATTTGTTTCCCATGCTTGCTAATTGGCAACGAGAGCGTACAATGGAAGACATTTTGATGCAATTGAAGAAAGAAATGCTGTCTCCTCAAAACCGGAAGCTAGCTCAACCTCCTGAAGGCAATGAAGAAGGCAGGATTGATCAAAAGGGGCTGGTGCTGAGATGTTGTATTGTGTAA 480 0.4521 MGSDGSGVVVPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPHLFPMLANWQRERTMEDILMQLKKEMLSPQNRKLAQPPEGNEEGRIDQKGLVLRCCIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1843 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Glsi09g1843 159 SUPERFAMILY UBC-like 9 142 IPR016135 -
Glsi09g1843 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 44 133 - -
Glsi09g1843 159 SMART ubc_7 14 158 - -
Glsi09g1843 159 FunFam Ubiquitin-conjugating enzyme E2 variant 1C 2 144 - -
Glsi09g1843 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
Glsi09g1843 159 Pfam Ubiquitin-conjugating enzyme 41 135 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1843 Glsi-ChrGlsi09 19276973 19286086 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1843 09 19276973 19286086 Glsi09g1843 09 19276973 19286086 ECH