Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1758 ATGGGTACGCTTCAGACTTGGAGAAAAGCTTATGGTGCCCTCAAAGACACCACCAAAGTTGGTCTTGCCCATGTCAACAGCGATTACGCGGATTTGGATGTTGCCATAGTCAAAGCCACGAATCACGTCGAATGTCCTCCTAAGGAGAGACATCTTAGAAAAATTCTATTTGCCACGTCTGCTATTCGGCCCCGTGCTGATGTTGCTTACTGCATTCATGCACTTGCCCGTCGACTGGCCAAGACACGAAATTGGACGGTGGCATTGAAAACACTGATAGTCATTCATAGGTTATTGAGGGAGGGAGATCCTACTTTTAAAGAAGAATTTCTGAATTTCTCACAGAGAGCACGCGTTCTCCAACTTTCTAATTTCAAGGATGATTCTAGTCCAATTGCTTGGGATTGCTCTGCCTGGGTACGTACATATGCATTATTTTTGGAAGAAAGGCTTGAATGCTTTCGGGTTTTGAAATATGATATTGAAGCTGAGCGCTTACCCAGGCCAGCCCAAGGAGAGGAGAAGGGGTACAGCAGGACCAGGGAGTTGGATAGTGAGGAGCTTTTGGAGCAGTTGCCTTCTTTGCAGCAGCTTCTCTATCGGCTTGTTGGTTGCAGGCCAGAAGGAGCAGCTGTTAACAATTATGTGATACAATATGCATTGGCTCTGGTACTGAAAGAGAGCTTTAAAATTTATTGTGCTGTTAATGATGGAATTATCAATCTTATTGATAAGTTTTTCGAGATGCCAAGACATGAAGCTATTAAAGCCCTTGATGTCTATAAACGTGCTGGGCAGCAGGCAGCAAGTCTCTCTGATTTCTATGAACTCTGCAAAGGATTGGAACTTGCTAGGAATTTTCAGTTTCCTGTCTTAAGGGAGCCTCCACAATCCTTTCTTACAACCATGGAAGAGTACATAAGGGAGGCACCACGAGTGGTTATGGGTCCAACTGAGCCATTGCTTCAGTTGACATACAGACCAGAAGAAGAAGTTCCTACAATTGAAGACAGCAAAGTATATGTTGAAGAAGAGGAGCCATCGGTACCTGTTGATAATGTTGTCTCCAATTTTGAGACTGTGCCTCCTCCACCTCCTCTTCCACCTCAAAACCATTTTGACACTGGAGACTTACTGGGTCTGAATGACACTGCTCCTGATGCATCATCAATAGAGGAAAGAAATGCTCTTGCCTTAGCCATAGTGCCCACTGAAACTGGCACTACATCAGCTTTTGACTCAAGTGCTGCTCAAGCAAAAGATTTTGATCCAACTGGATGGGAGCTTGCCTTGGTCACCACTCCAAGTAACAATATTTCTGCAGTCAATGAAAGACAATTGGCTGGTGGAATGGACTCCCTCACTCTTAACAGCTTATACGACGAAGCAGCATATAGATCACAGCAGCCGGTATACGGAGCACCAGCCCCAAACCCTTTTGAAGTACAAGATCCATTTGCTTTATCAGGCAGCATCCCTCCTCCGCCTGCTGTGCAAATGGCAGCAATGGCTCAACACCAAGCAAATCCATTCGGTCCATACCAACCTTACCAGCCACAGCCACAACAGCCACAACAGCAACATCTGCTGATGAACCCTGCAAATCCCTTTGGGGATGCAACAGGATTTGGGGCATTTCCTGTGAATCCCCTTTCTCACCCACAAAATAACAATCCGTTCGGAAGCACAGGTCTGATATGA 1701 0.4556 MGTLQTWRKAYGALKDTTKVGLAHVNSDYADLDVAIVKATNHVECPPKERHLRKILFATSAIRPRADVAYCIHALARRLAKTRNWTVALKTLIVIHRLLREGDPTFKEEFLNFSQRARVLQLSNFKDDSSPIAWDCSAWVRTYALFLEERLECFRVLKYDIEAERLPRPAQGEEKGYSRTRELDSEELLEQLPSLQQLLYRLVGCRPEGAAVNNYVIQYALALVLKESFKIYCAVNDGIINLIDKFFEMPRHEAIKALDVYKRAGQQAASLSDFYELCKGLELARNFQFPVLREPPQSFLTTMEEYIREAPRVVMGPTEPLLQLTYRPEEEVPTIEDSKVYVEEEEPSVPVDNVVSNFETVPPPPPLPPQNHFDTGDLLGLNDTAPDASSIEERNALALAIVPTETGTTSAFDSSAAQAKDFDPTGWELALVTTPSNNISAVNERQLAGGMDSLTLNSLYDEAAYRSQQPVYGAPAPNPFEVQDPFALSGSIPPPPAVQMAAMAQHQANPFGPYQPYQPQPQQPQQQHLLMNPANPFGDATGFGAFPVNPLSHPQNNNPFGSTGLI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1758 566 Gene3D - 7 161 IPR008942 -
Glsi09g1758 566 FunFam Clathrin assembly protein AP180 6 161 - -
Glsi09g1758 566 SUPERFAMILY ENTH/VHS domain 31 162 IPR008942 -
Glsi09g1758 566 CDD ANTH_N 32 154 - -
Glsi09g1758 566 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Glsi09g1758 566 FunFam Putative clathrin assembly protein 173 321 - -
Glsi09g1758 566 SUPERFAMILY GAT-like domain 178 309 - -
Glsi09g1758 566 Gene3D ANTH domain 173 321 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Glsi09g1758 566 SMART enth_2 30 161 IPR013809 -
Glsi09g1758 566 PANTHER CLATHRIN ASSEMBLY PROTEIN 6 505 IPR045192 GO:0048268|GO:0072583
Glsi09g1758 566 Pfam ANTH domain 31 309 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1758 Glsi-ChrGlsi09 16854481 16861582 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1758 09 16854481 16861582 Glsi09g1758 09 16854481 16861582 ECH