Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1480 ATGTTGATTACTTTGGAGGAGCCCATCATATGGGCCTCGGTGCATTATTTTCTTGCTAAACGAAAAAAATCTACATATCATTCCTCTGTCTCGTTCTTTCTCCTCTCGGAATCCGTCCGAATTCTGGAATCTGAGGCGGCCGGCGGGAAGGCATTAAGATCGGTTTTGGAATATTATGGATGTGGCATGGCAATCTTAGGCGTTGTTTGTTATTCGGTCAGAAACCTTGTAAACAAAATGTCTACGGCTGATGAACCACTATATCCAATAGCGGTGCTTATAGACGAGCTGAAAAATGATGACATCCAGCTACGCCTGAACTCAATTCGCAGACTATCAACAATTGCACGTGCTCTTGGGGAGGAGCGAACTCGAAAGGAATTAATTCCATTTTTGAGTGAGAACAATGATGATGATGATGAGGTGCTTCTTGCAATGGCTGAAGAGTTGGGAGTGTTCATTCCTTATGTTGGGGGAGTGGAACATGCCCATGTGTTACTCCCACCTCTGGAGACGCTTTGCAGTGTTGAGGAAACCTGTGTGAGAGATAAAGCTGTGGAGTCACTGTGTAGAATTGGATCTCAAATGAGGGAGAGTGATTTGGTTGAATGGTTCATCCCTTTGGTGAAGAGACTGGCAGCGGGTGAATGGTTTACTGCCCGTGTCTCTGCCTGTGGACTATTTCATATTGCGTACTCAAGTGCACCAGAAATGTCGAAGACGGAGTTGAGATCAATATATAGTCAGTTGTGTCAAGATGACATGCCAATGGTTAGAAGGTCTGCTGCAACAAATCTTGGGAAATTTGCTGCAACTGTTGAATATCCTCATCTGAAGGCTGACATCATGTCAATTTTTGAGGATCTTACTCAGGATGATCAAGACTCTGTTAGATTGTTGGCTGTGGAGGGCTGTGCTGCTCTTGGCAAGCTGTTGCAACCTCAAGATTGTGTTGCACATATACTCCCAGTTATTGTTAGCTTCTCTCAGGATAAGTCTTGGCGTGTACGTTACATGGTTGCTAATCAATTGTATGAGCTCTGTGAAGCTGTAGGCGCTGAACCTACCAGAACTGAATTGGTCCCTGCTTATGTGCGGCTACTACGAGACAATGAGGCTGAAGTACGAATAGCAGCTGCTGGAAAAGTCACTAAGTTTTGTCGGATTTTAAATCCAGAACTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGAATTGTCATCGGATTCTTCACAACATGTCCGTTCTGCTTTGGCTTCAGTGATAATGGGAATGGCTCCAGTGTTAGGAAAGGATGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTCTGAAGGATGAATTTCCTGATGTGCGCTTAAACATCATCAGCAAGCTCGATCAAGTGAATCAGGTTATTGGAATCGATCTATTATCTCAATCTTTGTTACCAGCCATTGTTGAGCTTGCTGAGGATAGGCATTGGAGGGTTCGCCTTGCAATAATAGAGTATATACCCTTATTGGCAAGTCAGTTAGGTGTAGGATTTTTCGATGACAAGCTTGGTGCTCTTTGCATGCAGTGGTTACAGGATAAGGTTCATTCAATTCGTGATGCAGCTGCTAACAACTTGAAGCGGCTTGCAGAAGAATTTGGTCCTGAGTGGGCTATGCAGCATATAATTCCACAGGTTTTAGAGATGATCCACAATCCACACTATTTGTATCGAATGACCATTCTTCGAGCTATCTCACTGCTTGCTCCTGTAATGGGCGATGATATCACTTGTTCAAAATTGTTGCCTGTCGTTATTGCTGCATCCAAAGACAAAGTGCCCAATATCAAGTTTAATGTGGCAAAGGTGTTAGAGTCAATCTTTCCCATAGTTGATCAGTCTGTGGTGGAAAAGACAATTCGTCCATGTTTGGTTGAGCTCAGTGAGGATCCCGATGTTGATGTGCGATATTTTTCCAACCAAGCACTTCAGGCAATTGATCATGTCATGATGTGTAGCTAA 2001 0.4353 MLITLEEPIIWASVHYFLAKRKKSTYHSSVSFFLLSESVRILESEAAGGKALRSVLEYYGCGMAILGVVCYSVRNLVNKMSTADEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCSVEETCVRDKAVESLCRIGSQMRESDLVEWFIPLVKRLAAGEWFTARVSACGLFHIAYSSAPEMSKTELRSIYSQLCQDDMPMVRRSAATNLGKFAATVEYPHLKADIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLQPQDCVAHILPVIVSFSQDKSWRVRYMVANQLYELCEAVGAEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIRDAAANNLKRLAEEFGPEWAMQHIIPQVLEMIHNPHYLYRMTILRAISLLAPVMGDDITCSKLLPVVIAASKDKVPNIKFNVAKVLESIFPIVDQSVVEKTIRPCLVELSEDPDVDVRYFSNQALQAIDHVMMCS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 438 476 IPR021133 -
Glsi09g1480 666 FunFam Serine/threonine-protein phosphatase 2A regulatory subunit A alpha isoform 81 660 - -
Glsi09g1480 666 SUPERFAMILY ARM repeat 86 659 IPR016024 -
Glsi09g1480 666 Pfam HEAT repeat 321 349 IPR000357 GO:0005515
Glsi09g1480 666 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT 82 661 - -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 555 593 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 516 554 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 477 515 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 321 359 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 243 281 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 282 320 IPR021133 -
Glsi09g1480 666 Gene3D - 81 662 IPR011989 -
Glsi09g1480 666 Pfam HEAT repeats 440 540 - -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 633 666 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 594 632 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 89 127 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 360 398 IPR021133 -
Glsi09g1480 666 ProSiteProfiles HEAT repeat profile. 399 437 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1480 Glsi-ChrGlsi09 11213642 11222207 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1480 09 11213642 11222207 Glsi09g1480 09 11213642 11222207 ECH