Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1470 ATGGAGACTGTGATATGTGGGAGACTGGCTCTCTCTCCCAACCACGTCTTCAACCCAAAGCCAGGGGATAAATATTCTCTTTGTAAAGGGTCATTCTCTAATCTTTGCATTCCCATGGCTACATTAGCAACAGGACCAGGTAAAGGAGGGGGACTGTTGGAGAAACCAGTTATTGAAAAAGGAACACCTGGCCGTGAATCTGAATTTGATTTGAGGAAATCACGGAAAACAGCGCCACCATACCGTGTGATATTGCACAATGACAACTACAATAAACGAGAATATGTTGTTCAAGTACTGATGAAGGTTATTCCTGGAATGACCCTTGATAATGCAGTTAATATCATGCAAGAAGCTCACCACAATGGGTTGTCAGTGGTGATCATCTGCGCCCAAGTTGATGCTGAAGAACACTGCATGCAACTTAGAGGCAACGGCCTACTGAGTTCAATTGAACCTGCAAGTGGTGGCTGCTGA 477 0.4465 METVICGRLALSPNHVFNPKPGDKYSLCKGSFSNLCIPMATLATGPGKGGGLLEKPVIEKGTPGRESEFDLRKSRKTAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHHNGLSVVIICAQVDAEEHCMQLRGNGLLSSIEPASGGC 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1470 158 SUPERFAMILY ClpS-like 75 153 IPR014719 -
Glsi09g1470 158 Gene3D - 75 153 IPR014719 -
Glsi09g1470 158 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 75 153 - -
Glsi09g1470 158 Hamap ATP-dependent Clp protease adapter protein ClpS [clpS]. 66 155 IPR022935 GO:0006508
Glsi09g1470 158 Pfam ATP-dependent Clp protease adaptor protein ClpS 77 144 IPR003769 GO:0030163
Glsi09g1470 158 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 7 158 IPR022935 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1470 Glsi-ChrGlsi09 11145397 11148630 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1470 09 11145397 11148630 Glsi09g1470 09 11145397 11148630 ECH