Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1445 ATGACGGACAACACGGACGATATAGCAGAGGAAATCTCGTTCCAGAGCTTCGATGATGACTGTAAGTTGCTTGGGAATCTTCTCAACGACGTTTTACTGCGAGAGGTTGGAAGCATGTTCGTGGAGAAACTGGAAAAAATCCGGATTCTTGCTCAGAGTGCTTGTAATATGAGGCAGGCAGGGATTGAGGACATGCCAGAGCTGCTCGAGAAGCAGTTAGCTTCAGAGTTATCGAAGATGACGTTAGAAGAAGCTCTGACCCTCGCTCGTGCCTTCAGCCATTATCTTACTTTGACGGGTATAGCTGAAACCCATCACAGGGTTCGTAAAGTACGGAACATGGCAAATTTATCAAAATCTTGTGATGACATCTTTAACCAGCTAGTGCAGGGTGGAGTTTCCCCAGACGAGCTTTATAACACAGTCTGCAAGCAGGAGGTTGAAATTGTTCTTACAGCTCATCCCACACAAATCAATCGCCGTACATTACAATACAAACACATTAGAATTGCTCATCTTTTGGATTACAATGATCGACCTGATCTTAGTCATGAAGATCGAGAAATGGTGATTGAAGATCTGGTGAGAGAGATAACTGCAATATGGCAGACAGATGAGCTTAGACGTCAAAAACCAACACCAGTTGATGAGGCTAGGGCTGGTTTGAATATTGTAGAGCAGTCACTATGGAAAGCCATCCCTCATTATTTACGTCGAGTCAGCAATGCTCTAAAAAAGCATACAGGAAAGCCACTTCCATTAACTTGTACTCCTATAAAGTTTGGATCTTGGATGGGGGGTGATAGAGATGGAAACCCAAATGTGACAGCAAAGGTCACAAAAGATGTTACTCTTTTATCAAAATGGATGGTGATTGACCTCTATTTTCGTGAAGTTGATAACCTCAGATTTGAGCTATCTATGAACCAGTGTAGTGATAAATTGTCAAGACTGGCACATGAAATTCTGGAACAAGAAGCTTTCTCAGAGGAGCGCTATGAGAGTTGGGATGAATCTCTGAGTAGAAGTCAATTGAAGCATCATGGTCAACAAGCTCCATTTCCAACACAACTTCCAGCAAGAGCTCATTTACCCTCTTTTGCCGAAAATGGTGAGTCTCAGTATCCTAGATTGGACATTCCAGGAATAGATTACACGCCACTCAATCACAAGGATGGTGAGATTTCTTCAAATTCATCATCGTTCAAGAGTGGCAGTTGTGATATTCAACCATCACTAACAAGTTCAGAAAATTCAGGTGCTTCTCAAGCACCTACAACCCCACGCTCCGCTGTCAACTCTAGTCAACTACATGCTCAGAGGAAATTGTTTGCTGAATCCCAGATAGGAAGGTCCAGTTTCCAGAAGCTTTTGGAGCCAAAGCTCCCTCAGCTTCCTGGAATTGCTCCTTACAGGGTTGTACTTGGGAATGTAAAAGATAAGCTTCTGAAAACTCGTAAGCGGTTGGAGCTTCTTCTTGAGGATCTTCCATGTGACTACGATCCTTTGAATTATTATGAAACAACTGATCAACTTTTGGAGCCTCTGCTCATCTGTTATGAATCTCTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGACCTGATTCGGAGAGTTGCTACCTTTGGAATGGTGTTGATGAAACTTGATTTACGTCAGGAATCTGGTAGACATGCTGAAACACTTGATGCAATCACCAAGTATTTGGATATGGGTACTTACAGTGAATGGGATGAAGAAAAGAAATTGGACTTCTTAACAAGAGAGCTAAAAGGGAAGAGGCCACTTGTTCCTTCCAGTATAGAGGTTGCTGCTGATGTTAAAGAAGTCTTGGATACCTTCCGAGTTGCTGCTGAGCTAGGGAGTGATTCACTTGGAGCCTATGTGATCTCTATGGCCTCAAATGCAAGTGATGTTCTTGCGGTGGAGCTTTTACAGAAAGATGCACGGCTTGCTGTTAGTGGGGAGTTGGGAAGACCATGTCCTGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTGAAGGACCTAAGAGGAGCTGGTTCAGTTATCCGAAAACTTTTATCAATCGATTGGTACCGTGAACACATTGTTAAGAACCATAATGGGCATCAAGAGGTTATGGTTGGATATTCTGATTCTGGTAAAGATGCTGGGCGATTTACTGCTGCTTGGGAACTTTATAAAGCTCAAGAGGATGTTACAGCTGCTTGCAATGAGTATGGTATTAAGGTTACTTTGTTCCATGGCCGTGGAGGGAGTATTGGTCGTGGTGGTGGCCCCACATATATGGCTATTCAGTCCCAACCACCTGGCTCTGTGATGGGAACCCTTCGGTCAACAGAGCAGGGAGAGATGGTACAGGCGAAGTTTGGATTGCCACAGACAGCCGTTAGACAGCTTGAAATATACACAACAGCTGTGCTACTCGCAACCCTTCGTCCACCTCTCCCGCCTCGGGAAGAAAAATGGCGAAATCTCATGGAAGATATCTCGAAAATCAGCTGCCAATGTTACCGAAGTGTAGTTTATGAAAACCCAGAATTCCTTGCCTACTTCCATGAAGCCACACCAGAAGCAGAACTTGGGTTCCTTAACATAGGAAGCCGCCCCACAAGAAGAAAGAGCAGTGTAGGAATAGGACATCTTCGCGCCATACCTTGGGTATTTGCATGGACACAAACCAGGTTTGTTCTCCCTGCTTGGCTTGGAGTTGGAGCTGGTTTAAAAGGTGTTTGTGAGAAAGGACACAGAGAAGAGCTCAAAGCCATGTACAAAGAGTGGCCTTTCTTTCAATGCACAATAGACCTTATAGAGATGGTTCTTGGGAAAGCTGACATTCCCATAATTAAGCACTATGATGAAGTCCTTGTGTCAGAGAAAAGGCGAGAACTTGGGCGGGAACTGAGGAGTGAACTCACAACAACAGAGAAGTTTGTGCTGGTTGTGAGTGGACATGAGAAGCTTCAGCAGAACAATAGGAGCTTAAGGAGGCTAATTGAGAATAGGCTTCCCTTTCTGAACCCCATGAACATGTTGCAGGTGGAGATACTTAAGAGGCTAAGACGTGATGATGACAATCTTAAAATCAGAGATGCTTTGCTTATCACCATTAATGGAATTGCTGCTGGGATGAGGAATACTGGTTGA 3165 0.4423 MTDNTDDIAEEISFQSFDDDCKLLGNLLNDVLLREVGSMFVEKLEKIRILAQSACNMRQAGIEDMPELLEKQLASELSKMTLEEALTLARAFSHYLTLTGIAETHHRVRKVRNMANLSKSCDDIFNQLVQGGVSPDELYNTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLDYNDRPDLSHEDREMVIEDLVREITAIWQTDELRRQKPTPVDEARAGLNIVEQSLWKAIPHYLRRVSNALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTKDVTLLSKWMVIDLYFREVDNLRFELSMNQCSDKLSRLAHEILEQEAFSEERYESWDESLSRSQLKHHGQQAPFPTQLPARAHLPSFAENGESQYPRLDIPGIDYTPLNHKDGEISSNSSSFKSGSCDIQPSLTSSENSGASQAPTTPRSAVNSSQLHAQRKLFAESQIGRSSFQKLLEPKLPQLPGIAPYRVVLGNVKDKLLKTRKRLELLLEDLPCDYDPLNYYETTDQLLEPLLICYESLQSCGSGVLADGRLADLIRRVATFGMVLMKLDLRQESGRHAETLDAITKYLDMGTYSEWDEEKKLDFLTRELKGKRPLVPSSIEVAADVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGELGRPCPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYREHIVKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVTAACNEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNLMEDISKISCQCYRSVVYENPEFLAYFHEATPEAELGFLNIGSRPTRRKSSVGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGVCEKGHREELKAMYKEWPFFQCTIDLIEMVLGKADIPIIKHYDEVLVSEKRRELGRELRSELTTTEKFVLVVSGHEKLQQNNRSLRRLIENRLPFLNPMNMLQVEILKRLRRDDDNLKIRDALLITINGIAAGMRNTG 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1445 1054 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1054 IPR022805 GO:0006099|GO:0008964|GO:0015977
Glsi09g1445 1054 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1054 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi09g1445 1054 MobiDBLite consensus disorder prediction 389 436 - -
Glsi09g1445 1054 Gene3D Phosphoenolpyruvate/pyruvate domain 289 365 - -
Glsi09g1445 1054 Gene3D Phosphoenolpyruvate/pyruvate domain 422 548 - -
Glsi09g1445 1054 FunFam Phosphoenolpyruvate carboxylase 4 428 548 - -
Glsi09g1445 1054 Pfam Phosphoenolpyruvate carboxylase 462 1054 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi09g1445 1054 Pfam Phosphoenolpyruvate carboxylase 19 337 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi09g1445 1054 MobiDBLite consensus disorder prediction 391 436 - -
Glsi09g1445 1054 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 712 724 IPR033129 -
Glsi09g1445 1054 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Glsi09g1445 1054 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi09g1445 1054 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi09g1445 1054 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Glsi09g1445 1054 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 17 1054 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1445 Glsi-ChrGlsi09 10862991 10871982 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1445 09 10862991 10871982 Glsi09g1445 09 10862991 10871982 ECH