LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi09g1353	ATGGGTGAAGATAATGAAGGAAGAAGAAGAAAAGCAATGGAGGCTCTATCTTTGCAAATAGACAAATACCCAAAAAATCTGCTTCAGAGATTCATGTCCAGTAGTAGTACTACACAACCATCCCAAAACGCAGAACCTCGGGAAGATTCGGAAGAGATTGAGCTCAATCTTGGCCTTTCACTGGGTGGTCGATTCGGAGTCGACAAGCATGCTAATAAGCTAATGCGATCATCGTCTATTGTGGGGACAATGCCTCTCGCAAGAGAAAATGAGTCTACAACCCCACCGCCGGCTTCGTACCCAACCCTCATGAGGTCTTCTTCGCTTCCGACGGAGACTGAGGAGGAATGGAGGAAGAGGAAGGAGTTGCAGACATTGAGGCGAATGGAGGCGAAGAGAAGGCGGTCTGAGAAGCAGAGGAACTCTAAGACGGAGAGAGAAGGGGGCGGCGGCGTTCTGGAGGAAGAAAGGCGTGAAATTGAGGGTGCAACGGGGTCGAATAGGCTTGGTTCAACGGTGTCACCACCTGTTGGGTTGCCCAGTTGGGCTGCATCAGCAAGGCAAGTGGTTCTTAGTGATGTGTTGGCGGAAGGGAAGGTTGGAATTTTGGGAGGGACTGTTGGTTTCCAGGGATTCGGACAGCCATCTTCTCAAGTCTCGGCGGAACCCCAAGGGGGAAGCTCGTCGGGAAGGTCAGAAATGGAGAGCAAAACTTTTCAAGGATCAAGTAGTTGTGGTGAAGCAAGAAGCCCTGTTGGTAATCAGTTGTTGCAGGAAAGAAGCAGTCAGGATGCTGTGGGTTCCTCGGGGACAAAGACAAATGAGAATATGATCAAAACATCGAGAGTTGAGGTGGAAAATCCATCAAAGAAACCTGAACCTGCCCAAAAAAGAGGGAGGGAAGTTGGGTCAAACTCAATGGGAGATATGCCTTGTGTTTTTACAAAAGGGGATGGCCCTAATGGAAGAAGAATTGAGGGGATCTTATACAGATATGGTAAAGGAGAGGAAGTAAGGATAATGTGTGTATGCCATGGAAACTTCCTCTCTCCAGCAGAGTTTATTAAACATGCTGGTGGTGGTGATGTTGCTCACCCACTCCGGCACATAGTTGTAAACCCTTCCTCTACTCCCTATTTTTGA	1143	0.4838	MGEDNEGRRRKAMEALSLQIDKYPKNLLQRFMSSSSTTQPSQNAEPREDSEEIELNLGLSLGGRFGVDKHANKLMRSSSIVGTMPLARENESTTPPPASYPTLMRSSSLPTETEEEWRKRKELQTLRRMEAKRRRSEKQRNSKTEREGGGGVLEEERREIEGATGSNRLGSTVSPPVGLPSWAASARQVVLSDVLAEGKVGILGGTVGFQGFGQPSSQVSAEPQGGSSSGRSEMESKTFQGSSSCGEARSPVGNQLLQERSSQDAVGSSGTKTNENMIKTSRVEVENPSKKPEPAQKRGREVGSNSMGDMPCVFTKGDGPNGRRIEGILYRYGKGEEVRIMCVCHGNFLSPAEFIKHAGGGDVAHPLRHIVVNPSSTPYF	380

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	86	174	-	-
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	86	110	-	-
	Glsi09g1353	380	Pfam	Ethylene-responsive binding factor-associated repression	48	82	IPR012463	-
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	111	163	-	-
	Glsi09g1353	380	Coils	Coil	119	146	-	-
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	27	53	-	-
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	214	283	-	-
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	284	298	-	-
	Glsi09g1353	380	PANTHER	AFP HOMOLOG 2	23	376	IPR031307	GO:0007165
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	28	44	-	-
	Glsi09g1353	380	MobiDBLite	consensus disorder prediction	214	318	-	-
	Glsi09g1353	380	Pfam	Putative nuclear localisation signal	103	236	IPR032310	-
	Glsi09g1353	380	Pfam	Tify domain binding domain	338	372	IPR032308	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi09g1353	Glsi-ChrGlsi09	9951540	9955506	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi09g1353	09	9951540	9955506	Glsi09g1353	09	9951540	9955506	ECH