Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1051 ATGGCAGCAGGTAAGGACCTTGACACCATGAGAAGGAGGATGGCCTCTGTATCCAACCATCTCATTCCCTTTCACTCGGCGCCTTCGCATTATGGGGCAGTGGGGTTGTGTAATACTTCCATGAAAGATACCTACCACCGGGTTCATGGTGAAGTTCCCTCTCATGAGGTGGTTTGGAGGATCACTTCGGATGACTCTGGCAAGGACTTTACTGACATTGTATACGAGAAGGCTGTAGGTGAAGCCATAGCAAAGATTACTATTAATAGGCCAGAGAGGAGGAATGCGTTTCGGCCTCATACCGTTAAGGAGCTTATTCGTGCTTTTAATGATGCCAGGGATGATAGCTCTGTGGGGGTCATCATTCTCACTGGGAAGGGAGCCAAGGCATTCTGTAGCGGTGGTGACCAGGATTTGAGAACTGCCGATGGTTATGCTGATTATGAAAATATTGGCCGCCTTAATGTGTTAGACTTGCAGGTGCAGATCCGTCGTCTTCCAAAACCAGTAATTGCAATGGTAGCAGGTTACGCTGTTGGAGGAGGACACGTATTGCATATGGTCTGTGATCTAACTATAGCAGCAGATAATGCCATATTTGGACAAACTGGTCCTAAGGTAGGAAGCTTCGATGCTGGATATGGAAGTTCCATCATGTCACGTTTGATAGGACCCAAAAAAGCACGTGAAATGTGGTTTCTCACAAGGTTCTATACTGCTGTTGAAGCAGAGAAAATGGGCCTTGTCAACACTGTTGTACCACTAGAGAATTTAGAGAAAGAAACAGTAAAATGGTGTCGGGAGATTCTAAGGAACAGCCCAACTGCAATCCGGGTTCTCAAGTCAGCTCTTAATGCAGTGGATGATGGCCATGCTGGACTTCAGGAACTTGGTGGAAACGCAACACTAGTATTTTATGGCACTGAGGAAGCTAATGAGGGAAAGACAGCGTATATGCAACGTAGAGCCCCAGATTTTTCGAAGTTTCCTCGACGCCCTTAA 1002 0.4651 MAAGKDLDTMRRRMASVSNHLIPFHSAPSHYGAVGLCNTSMKDTYHRVHGEVPSHEVVWRITSDDSGKDFTDIVYEKAVGEAIAKITINRPERRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGAKAFCSGGDQDLRTADGYADYENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLIGPKKAREMWFLTRFYTAVEAEKMGLVNTVVPLENLEKETVKWCREILRNSPTAIRVLKSALNAVDDGHAGLQELGGNATLVFYGTEEANEGKTAYMQRRAPDFSKFPRRP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1051 333 Gene3D - 55 272 - -
Glsi09g1051 333 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 4 333 - -
Glsi09g1051 333 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 271 321 - -
Glsi09g1051 333 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 171 191 IPR018376 GO:0003824
Glsi09g1051 333 NCBIfam 1,4-dihydroxy-2-naphthoyl-CoA synthase 70 329 IPR010198 GO:0008935|GO:0009234
Glsi09g1051 333 Pfam Enoyl-CoA hydratase/isomerase 81 327 IPR001753 -
Glsi09g1051 333 FunFam 1,4-dihydroxy-2-naphthoyl-CoA synthase 53 270 - -
Glsi09g1051 333 SUPERFAMILY ClpP/crotonase 69 329 IPR029045 -
Glsi09g1051 333 CDD crotonase-like 73 269 - -
Glsi09g1051 333 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 59 332 IPR010198 GO:0008935|GO:0009234
Glsi09g1051 333 Gene3D - 273 321 IPR014748 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1051 Glsi-ChrGlsi09 7329282 7332089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g1051 1 333 Acyl Lipid Metabolism Gene Families AT1G60550 79.228 0.0 555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1051 09 7329282 7332089 Glsi09g1051 09 7329282 7332089 ECH