Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g1039 ATGGTGATAGTAGCATCACTACCTGGGGGTAACCTCTTCTCCTCCTTACCTTCAACCCCACCACCCAACGACCCCACTGTCACCCCCGCAGCTCCTTCCCCACCAATCCCAATTCCCAAATACCCACCCCCCCGCAGATTCCACAAGTCCCTACAGCATCCTCCTGAACCTTCAAAACCCCAATCCAATCCGGCCTTGAAGTTCCATCGCAATTCTAAGTACTACAAACCCGTCAAAGATGGTGTTATTGCATCAGAGGGCGATCGCTCCGTCGTCATCGGCGAGTCTGGCATGTCCTACCTTCTACCTGGAGCCCCATTTGAATTCCAGTATAGCTATTCCGAGACACCGAAGGTCAAGCCGTTGGCCATTCGGGAGCCAGCGTTCTTACCTTTCGCGCCGCCCACAATGCCGAGGCCATGGACTGGGAAAGCCCCATTGAAGAGCTCGAAGAAAAAGATTCCACTTTTTGATTCCTTTAATCCTCCCCCACCAGGTACGAAAGGAGTGAAGCAAGTTGAAATGCCCGGGCCGTTTCCACTTGGGAAGTATCCGAAGGAAGGAAAGACCAGAGAGGAGATACTTGGGGAGCCTTTGAAGAAGTGGGAGATAAGAATGCTTGTTAAACCTATGTTGGCCGATAATCGCCAGGTTAATCTCGGAAGGGATGGATTAACTCATAACATGTTGGAGTTAATACATTCGCATTGGAAGCGTTGCCGTGTCTGTAAAGTTCGTTGTAAAGGTGTTCCAACCGTAGATATGGATAATGTTTGCCATCATCTTGAGGAGAAAACAGGGGGGAAAATAATTCATCGAGTTGGTGGTGTAGTTTATCTTTTCCGTGGGAGAAATTACAACTATCGTACTCGTCCACAATATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTACCCAAAACTTATCCAAGAAGCTCCAGAAGGGTTAACAAAAGCTGAAGCTGACATATTGAGGAAGAAAGGGAAAAAGCTATTGCCAATATGTAAATTAGCTAAAAATGGAGTCTACGTTTCCCTTGTGAAGGATGTAAGACATGCTCTTGAAGGAAGTCCTTTGGTGAAGATTGACTGCAAGGGGTTGGAACCCAGTGATTACAAGAAAATAGGTGCCAAACTTAAGGAATCGGTTCCTTGTGTGCTATTGTCTTTCGATGATGAACAGATATTGATGTGGAGGGGGAAAGATTGGAAATCAATGTATCCAGAAGCTCCTTCAGTTTCAAGTCTTGCTGCCATTGCAGGGAAGTTGGACAATTCAGGTGAGACTGCTAATGATCAAAGTAAGCATGATAGCAACATGATGAGCATAAGCCCTAAAATGATGTCTCTGTGGAAGCGTGCAATTGAGTCAAGCAAGGCTCTGTTGCTGGATGAGATTAATCTTGGTCCTGATGCTCTCTTGGAGATGGTAGAGGAATTTGAGGGTATTTCACAGGCCACGGAGCACTCCAACCCGGCATTTATTTTGTCAAGTGAAGATGGTGGCGCTAAAGGTTCAATTGCAGACTTTGAAGAAGCCAAAGAAGACAGTTATCATAGTGATGGCTTACCTACTGAGGTTGATGATGATTATGATGAGTACCAGGATGATGATTATGATGAGGATGGAGCGTATGATGAGGTGGATTCATCAGCCCCACCTGGATCATTACCTGTTGATTTAATTGCCGAAAAGCTCAGACCAAAACAAGACAAGTAA 1722 0.4605 MVIVASLPGGNLFSSLPSTPPPNDPTVTPAAPSPPIPIPKYPPPRRFHKSLQHPPEPSKPQSNPALKFHRNSKYYKPVKDGVIASEGDRSVVIGESGMSYLLPGAPFEFQYSYSETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQVEMPGPFPLGKYPKEGKTREEILGEPLKKWEIRMLVKPMLADNRQVNLGRDGLTHNMLELIHSHWKRCRVCKVRCKGVPTVDMDNVCHHLEEKTGGKIIHRVGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQEAPEGLTKAEADILRKKGKKLLPICKLAKNGVYVSLVKDVRHALEGSPLVKIDCKGLEPSDYKKIGAKLKESVPCVLLSFDDEQILMWRGKDWKSMYPEAPSVSSLAAIAGKLDNSGETANDQSKHDSNMMSISPKMMSLWKRAIESSKALLLDEINLGPDALLEMVEEFEGISQATEHSNPAFILSSEDGGAKGSIADFEEAKEDSYHSDGLPTEVDDDYDEYQDDDYDEDGAYDEVDSSAPPGSLPVDLIAEKLRPKQDK 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g1039 573 MobiDBLite consensus disorder prediction 1 69 - -
Glsi09g1039 573 SUPERFAMILY YhbY-like 317 408 IPR035920 -
Glsi09g1039 573 Gene3D - 198 294 IPR035920 -
Glsi09g1039 573 ProSiteProfiles CRM domain profile. 315 411 IPR001890 GO:0003723
Glsi09g1039 573 Pfam CRS1 / YhbY (CRM) domain 201 282 IPR001890 GO:0003723
Glsi09g1039 573 Pfam CRS1 / YhbY (CRM) domain 317 400 IPR001890 GO:0003723
Glsi09g1039 573 ProSiteProfiles CRM domain profile. 197 293 IPR001890 GO:0003723
Glsi09g1039 573 FunFam CRS2-associated factor 1, chloroplastic 316 411 - -
Glsi09g1039 573 MobiDBLite consensus disorder prediction 527 548 - -
Glsi09g1039 573 MobiDBLite consensus disorder prediction 18 44 - -
Glsi09g1039 573 FunFam CRS2-associated factor 1, chloroplastic 198 293 - -
Glsi09g1039 573 SMART CRS1_YhbY_2 317 400 IPR001890 GO:0003723
Glsi09g1039 573 SMART CRS1_YhbY_2 199 282 IPR001890 GO:0003723
Glsi09g1039 573 MobiDBLite consensus disorder prediction 514 573 - -
Glsi09g1039 573 SUPERFAMILY YhbY-like 198 292 IPR035920 -
Glsi09g1039 573 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 53 567 IPR044599 GO:0000373
Glsi09g1039 573 Gene3D - 317 411 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g1039 Glsi-ChrGlsi09 7279340 7284002 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g1039 09 7279340 7284002 Glsi09g1039 09 7279340 7284002 ECH