Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0997 ATGAAGTTTATGAAACTGGGATCTCGTCCAGATAACTTCTACACTACAGAGGCAGTAAGGTCAGTTTCTTCTGAAGTTTCCAGCGACCTCATAATTCAAGTGAAAGGAAGTAGATATCTTCTTCATAAGTTTCCCCTGCTGTCCAAATGCTTGCGCCTACAAAGGTTATGCTCAGAGTCTCCTGATTCTTCTCAGCACCAAATAATCCAACTAGCTGATTTTCCTGGTGGAATGGAGGCATTTGAACTCTGTGCTAAGTTCTGCTACGGTATTACTATCACTCTCAGTGCTTACAACATTGTAGCTGTTCGATGTGCTGCCGAATACTTACAGATGACAGAGGATGTGGAGAAGGGAAACTTAATTTATAAGCTTGAGGTTTTTTTCAATTCTTGCATTCTTCATGGTTGGAAGGATTCTATTGTGACTCTACAGAGCACCAAAGCATTGCCTTTGTGGTCAGAGGAATTGGATATTACAAGCCGATGCATTGAAGCAATTGCCTCAAAGGTTTTAAGTCACCCCTCAAAGGTGAGTTTGTCACATAGTCATTCTCGAAGGGTCAGGGACGATATATCTTGCAATGGAACCGAAAGTCAAAGACATAAATCAGCAAGTAAGGGATGGTGGGCTGAAGATTTAGCAGAGTTGAGCATCGAACTCTATTGGAGAACCATGATAGCAATTAAATCTGGTAGCAAGATACCCTCAAATATCATAGGTGATGCATTGAAAGTTTATGCTTCTCGTTGGCTACCCAATATCTCAAGAAAAGCACATTTCAATAAGCAAGCAGCATCCGACTCTGATTCCTCAGACTCGGCAAGTGAAATAACCTCAAAGCATCGTCTGCTTTTGGAATCGATAGCAAGCTTGCTTCCAGCAGAGAAAGGTGCTGTTTCCTGTAGCTTCCTTCTTAAACTCTTGAAAGCAGCTAATATTCTCAATGCTTCTTCCTCTTCAAAAATGGAATTAGCTAGGAGAGTGGGACTTCAGTTGGAGGAAGCCACAGTGAATGATCTTTTAATACCCTCATTATCTTACTCAAATGATATGCTGTATGATGTTGAGTTGGTGATGACCATATTGGAACAATTTATGTTACAAGGGCAGAGTCCCCCAACCAGCCCACCAAGATCCAGGCTGGCCGTTGAAAGAAGGAGGTCCCGTTCAGCAGAGAATATAGATTTTGAATTCCAGGAGAGTAGGAGGTCGTCCTCGGCATCGCATAGCTCAAAATTGAAGGTGGCAAAGCTTGTGGATAAGTATCTTCAAGAGGTTGCCAGGGACGTGAATTTGCCTTTGACCAAATTCACTGCTCTTGCTGAAACTATACCAGATTTTGCAAGACATGACCACGATGATCTTTACAAAGCTATTGACATTTATCTGAAGGCTCATCCAGAACTCAACAAGAGTGAAAGGAAAAGACTTTGTCGAATCCTTAACTGCAAGAAACTGTCCATGGAGGCCTGCATGCATGCAGCCCAGAATGAACTACTTCCCCTAAGGGTCGTCGTCCAAGTGCTCTTCTTTGAGCAAGCCCGAGCAGCAGCAGCTGGTGGCAAAGTGACTGACTTGCCAAGCAACCTCAAGGCACTACTTAGGACACATGGCATTGACCCATTAAAACATACTGCTCCACTAAGCACTACTACAAGCATACATGGAGATGATCAATGGAGTGTTTCAGGCTTCAAGTCACCAAAGTCGAGGACTTCAACTCTCAGGATGAAGCTTGCTGAGGATGATGACTTAGATGATATTGCCCGCAATGGAATTGGGAGAACTTCCAAGTTTAAGTCTCTTCGTGCTCTTCCTACTCAACCCAAAAGAATGTTTAGTAAGTTCTGGTCCACTAATAGAAGCACCACAGAAAAGAATTGA 1887 0.4298 MKFMKLGSRPDNFYTTEAVRSVSSEVSSDLIIQVKGSRYLLHKFPLLSKCLRLQRLCSESPDSSQHQIIQLADFPGGMEAFELCAKFCYGITITLSAYNIVAVRCAAEYLQMTEDVEKGNLIYKLEVFFNSCILHGWKDSIVTLQSTKALPLWSEELDITSRCIEAIASKVLSHPSKVSLSHSHSRRVRDDISCNGTESQRHKSASKGWWAEDLAELSIELYWRTMIAIKSGSKIPSNIIGDALKVYASRWLPNISRKAHFNKQAASDSDSSDSASEITSKHRLLLESIASLLPAEKGAVSCSFLLKLLKAANILNASSSSKMELARRVGLQLEEATVNDLLIPSLSYSNDMLYDVELVMTILEQFMLQGQSPPTSPPRSRLAVERRRSRSAENIDFEFQESRRSSSASHSSKLKVAKLVDKYLQEVARDVNLPLTKFTALAETIPDFARHDHDDLYKAIDIYLKAHPELNKSERKRLCRILNCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAAAGGKVTDLPSNLKALLRTHGIDPLKHTAPLSTTTSIHGDDQWSVSGFKSPKSRTSTLRMKLAEDDDLDDIARNGIGRTSKFKSLRALPTQPKRMFSKFWSTNRSTTEKN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0997 628 ProSiteProfiles NPH3 domain profile. 208 516 IPR027356 -
Glsi09g0997 628 Gene3D Potassium Channel Kv1.1; Chain A 15 118 IPR011333 -
Glsi09g0997 628 SUPERFAMILY POZ domain 21 115 IPR011333 -
Glsi09g0997 628 PANTHER OS12G0117600 PROTEIN 23 564 IPR043454 -
Glsi09g0997 628 Pfam NPH3 family 209 492 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0997 Glsi-ChrGlsi09 7008028 7010575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0997 26 522 EF-hand Containing Proteins AT3G44820 35.619 2.59e-94 302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0997 09 7008028 7010575 Glsi09g0997 09 7008028 7010575 ECH