Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0789 ATGGCTACCTTGTTTCCAACACGGTGCTTGATATCTGTGGATTCACCACGTAACCGCTATCGTTTCCGAAACCCTACCCCTTCCTTCCTTCTCATCTCCTGCTCCAGCAAAGCCCTAGTGCCATTCAGTGGCTCAATTCGATTCTCCGGTAATCGAAATGTGATACCTCATTCGCCAGCCGCAACCGCCGACGTCGACTATAAGGCGTATTCAGTAAAGCCTGTCAACTTGCCTCAGACTTTTGTGCGCCTTGCTGTCTCTGCTGTGCTGTTTCTTGGCTTTGGATTTTGCTTTGGCATTCGTGTCTGTTCGGCTTCTTCGTCGACTCTCACCGCCAGTTCTTCATCGCTTCAGGAGAAGCAGACAATACAAGATGATCATGACGGAAGAAAACAAGATAACGCAGAAAATGAAGTAGATAAGGATTTTGAAGCAGCTTTTAACGCTTGGAAGTCTAAAACATACGCGTTGACTGTTCCTCTCAGACTTGTTGCTTTACGTGGCTCTGTGCCTCCTTCATGGATCAAGGACTTCATGAGATCTCAAGGGAAGAGATTAAAGTTCAATGTGAAGTATAATGCAAGTCTTGAGAGCATCTTCTCTGATCTATCAATTCCCTTTTCTAAAGGTAATCTTGGACCTTCATCTGCTTTGGCAGCAGATATTGTTAGCATTGGCGACTCCTGGCTTAAATTTGCTATCAATAAAGCTATAATTGAGCCAATACCAGGGGTAGACGACCAGGATTGGTTTAAAGGCCTGGATGAGAAATGGAAGGTATACCTACGCAGGAACAGTGAGGGAGAAATAGATCCTAAAGGTCACATATGGGCTGCTCCGTATCGATGGGGTTGCATGGTAATAGCATACAAGAAAAATAAATTTCAAAAGCATAATTTGGCTCCTATAGAGGACTGGGCAGATTTGTGGCGGCCAGAGCTTGCAGGGAGAATCTCAATGGTGGATTCTCCCAGAGAGGTTGTTGGTGCAGTTTTGAAGTATATGGGAGCCTCATACAATACAAACAATATCAATTTGCAAGTTGATGGTGGGAGAGATGCCGTTAAGCATAATTTGGCTATACTTGGAAAGCAGGTTCGGCTATTTGACAGTGTTCACTATTTGAAAGCTTTTGGAGTTGGAGACGTGTGGGTAGCTGTTGGATGGAGTAGTGATGTTATTCCTATTGCCAAGCGTATGTCAAATGTTGCAGTAATTGTTCCGAAGTCTGGAGCTAGTTTATGGGCAGATCTCTGGGCAATTCCTGCTGCCACTCGGATTCAAACAAATCGGATTGGGGGTCGAGTCAGGGGACCATCTCCATTAATCCATCAATGGATGGAGTTTTGTCTGCAAGCTGCAAGAGCACTACCCTTTAAGCAGGAGGTAATCCCAGGTGCCTCTCCCTCTGTTCTTCAAGGATCGTCAGCCAACGTGCCCATGGAGCTCACCAAGGGTAGACCAAGACCAGATACCAATCTTATTTCTGGAGCACCACCACCTGAAATATTAGAAAAGTGTGAGTTTCTAAAGCCATTATCTAATTCAACACTGTCAGATTACGGCTGGTTGATTGCAACGATACAAGAACCTGGCCATGGATTGATACACAAAATGCGTAAGTACATCTCATCAATGCTTAAATTATCTGGAAAGTTTGATTGA 1665 0.4462 MATLFPTRCLISVDSPRNRYRFRNPTPSFLLISCSSKALVPFSGSIRFSGNRNVIPHSPAATADVDYKAYSVKPVNLPQTFVRLAVSAVLFLGFGFCFGIRVCSASSSTLTASSSSLQEKQTIQDDHDGRKQDNAENEVDKDFEAAFNAWKSKTYALTVPLRLVALRGSVPPSWIKDFMRSQGKRLKFNVKYNASLESIFSDLSIPFSKGNLGPSSALAADIVSIGDSWLKFAINKAIIEPIPGVDDQDWFKGLDEKWKVYLRRNSEGEIDPKGHIWAAPYRWGCMVIAYKKNKFQKHNLAPIEDWADLWRPELAGRISMVDSPREVVGAVLKYMGASYNTNNINLQVDGGRDAVKHNLAILGKQVRLFDSVHYLKAFGVGDVWVAVGWSSDVIPIAKRMSNVAVIVPKSGASLWADLWAIPAATRIQTNRIGGRVRGPSPLIHQWMEFCLQAARALPFKQEVIPGASPSVLQGSSANVPMELTKGRPRPDTNLISGAPPPEILEKCEFLKPLSNSTLSDYGWLIATIQEPGHGLIHKMRKYISSMLKLSGKFD 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0789 554 MobiDBLite consensus disorder prediction 116 135 - -
Glsi09g0789 554 CDD PBP2_PotD_PotF_like_1 160 527 - -
Glsi09g0789 554 Gene3D - 284 435 - -
Glsi09g0789 554 MobiDBLite consensus disorder prediction 121 135 - -
Glsi09g0789 554 Pfam Bacterial extracellular solute-binding protein 220 469 - -
Glsi09g0789 554 SUPERFAMILY Periplasmic binding protein-like II 161 426 - -
Glsi09g0789 554 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 322 341 IPR001188 GO:0015846|GO:0019808|GO:0042597
Glsi09g0789 554 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 275 291 IPR001188 GO:0015846|GO:0019808|GO:0042597
Glsi09g0789 554 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 304 318 IPR001188 GO:0015846|GO:0019808|GO:0042597
Glsi09g0789 554 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 408 427 IPR001188 GO:0015846|GO:0019808|GO:0042597
Glsi09g0789 554 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 81 528 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0789 09 5433524 5437591 Glsi09g0789 09 5433524 5437591 ECH