Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0720 ATGGATCATTTTCGTTTTCCTCCGGCGACCGAAGCATCTTTTGGTCGACCATACAGCGGCCTCGGAACTATGCTCGGGTCGAGAGGATGTCCTCCTGGGTTTACTGGAACACAGAACTGGGCAATGTTGGGAAGCGGGGGGGTTTCAGACGGGTACGAGGTTGGCTCAAAGAGACAAAGAATGATGGAATCCGATCCATACTTCGCAGTGAGCAGCGGCACAGACAGCTTTCGACCTTATGGATATGCTGGTGACTTCCATCCCCCTCCCTTTCCTGTGGTTCGTCTGAGGGGGCTTCCATTCAACTGCACCGATATTGACATTTTCAAGTTCTTTGCTGGTTTGGACATTGTGGATGTGTTGCTGGTTAACAAGAATGGAAGGTTTTCAGGAGAGGCCTTAGTGGTCTTTGCTGGAGCAATGCAGGTTGAGTTTGCTCTACAGAGAGATCGACAGAACATGGGGAGAAGATATGTGGAAGTTTTTAGGTGTAAGAGGCAGGATTATTATAATGCTGTTGCTGCTGAGGTAAATTATGAAGGAATATATGATAGTAACCGCCTTGGAAGCCCTCCTCCTTCCCGCCCCAAGAGGTTCAGTGATAAGGATCAAATGGAATACACTGAGATACTGAAGATGCGTGGTCTGCCCTTCACTGTTAAGAAATCTGAAATTGTTGACTTTTTTGAAGATTTCAAGCTGATAGAAGATAGGATACATATTGCATGTCGCCCCGATGGGAAAGCTACCGGAGAAGCATATGTGGAGTTTGTTTCTACAGAGGAGGCTAAGAGAGCAATGTGCAAGGATAAGATGACAATTGGATCAAGGTACGTGGAGCTGTTTCCTACTACACCGGATGAAGCTAGAAGGGCACAGTCAAGATCAAGGCAGTGA 897 0.4705 MDHFRFPPATEASFGRPYSGLGTMLGSRGCPPGFTGTQNWAMLGSGGVSDGYEVGSKRQRMMESDPYFAVSSGTDSFRPYGYAGDFHPPPFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKNGRFSGEALVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVAAEVNYEGIYDSNRLGSPPPSRPKRFSDKDQMEYTEILKMRGLPFTVKKSEIVDFFEDFKLIEDRIHIACRPDGKATGEAYVEFVSTEEAKRAMCKDKMTIGSRYVELFPTTPDEARRAQSRSRQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0720 298 Gene3D - 195 298 IPR012677 -
Glsi09g0720 298 Gene3D - 92 175 IPR012677 -
Glsi09g0720 298 CDD RRM_hnRNPH_ESRPs_RBM12_like 93 162 - -
Glsi09g0720 298 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED 87 290 - -
Glsi09g0720 298 SUPERFAMILY RNA-binding domain, RBD 208 295 IPR035979 GO:0003676
Glsi09g0720 298 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 213 279 IPR000504 GO:0003723
Glsi09g0720 298 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 157 IPR000504 GO:0003723
Glsi09g0720 298 SUPERFAMILY RNA-binding domain, RBD 84 171 IPR035979 GO:0003676
Glsi09g0720 298 CDD RRM_hnRNPH_ESRPs_RBM12_like 210 282 - -
Glsi09g0720 298 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 209 286 IPR000504 GO:0003723
Glsi09g0720 298 SMART rrm1_1 210 282 IPR000504 GO:0003723
Glsi09g0720 298 SMART rrm1_1 93 162 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0720 Glsi-ChrGlsi09 4942252 4944509 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0720 09 4942252 4944509 Glsi09g0720 09 4942252 4944509 ECH