Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0656 ATGGCGAGGTACGACAGAGCAATTACGGTATTCTCACCCGATGGCCATCTCTTTCAAGTTGAATACGCCCTCGAAGCTGTTCGTAAAGGCAACGCCGCCGTCGGCGTTCGTGGCACCGATATCGTCGTTCTCGGCGTCGAGAAAAAATCAGCTGCCAAACTCCAAGACTCCAGATCGGTGAGAAAGATTGTCAATCTGGATGATCACATTGCCCTTGCTTGTGCAGGACTAAAAGCAGATGCCCGTGTCCTTGTAAACAGGGCACGAGTTGAATGTCAAAGCCACAGGCTTACAGTTGAGGATCCAGTGACAGTTGAGTACATAACTCGTTACATTGCAGGTCTACAGCAGAAGTACACACAAAGTGGTGGCGTGCGACCATTTGGCCTTTCAACCTTGATTGTAGGCTTTGATCCATATACTGCTACACCATCCCTGTACCAAACAGATCCTTCTGGGACTTTTTCAGCTTGGAAAGCTAATGCAACTGGCAGAAACTCAAATTCAATTCGGGAGTTCCTAGAGAAGAACTACAAAGAAACATCTGGGCAAGAAACTGTAAAACTGGCTATCCGAGCATTGCTTGAAGTTGTCGAGAGTGGAGGGAAGAACATTGAAGTTGCTGTGATGACTAAGGAGCATGGTCTGCGGCAACTTGAGGAAGCTGAAATTGATGCCATTGTGGCTGAGATTGAAGCAGAGAAAGCAGCTGCTGAGGCTGCAAAGAAAGGCCCTCTTAAGGAGACATGA 750 0.4773 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDIVVLGVEKKSAAKLQDSRSVRKIVNLDDHIALACAGLKADARVLVNRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTATPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKETSGQETVKLAIRALLEVVESGGKNIEVAVMTKEHGLRQLEEAEIDAIVAEIEAEKAAAEAAKKGPLKET 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0656 249 FunFam Proteasome subunit alpha type-4 1 241 - -
Glsi09g0656 249 Pfam Proteasome subunit A N-terminal signature 4 26 IPR000426 GO:0006511|GO:0019773
Glsi09g0656 249 CDD proteasome_alpha_type_7 4 210 - -
Glsi09g0656 249 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 246 IPR029055 -
Glsi09g0656 249 ProSiteProfiles Proteasome alpha-type subunit profile. 19 228 IPR023332 -
Glsi09g0656 249 ProSitePatterns Proteasome alpha-type subunits signature. 4 26 IPR000426 GO:0006511|GO:0019773
Glsi09g0656 249 Pfam Proteasome subunit 27 210 IPR001353 GO:0005839|GO:0051603
Glsi09g0656 249 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 234 IPR029055 -
Glsi09g0656 249 Coils Coil 219 239 - -
Glsi09g0656 249 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 8 233 - -
Glsi09g0656 249 SMART Proteasome_A_N_2 4 26 IPR000426 GO:0006511|GO:0019773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0656 Glsi-ChrGlsi09 4541481 4544036 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0656 09 4541481 4544036 Glsi09g0656 09 4541481 4544036 ECH