Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0535 ATGTTAAGCTGTACTCTGCGAAAACCTCCACTCCGCTTCTCTTCCTTCCTCCTCTTCCTCTCTGCGGTTTTCCTCTCCTCCAGGACTATGATTAAACTATTTAAAGTTAAGGAAAAGCAGAGAGAACTTGCAGAGAATGCAAGTGGCGGAGCACCCATTAAGAAACAAACTGCTGGGGAGTTGCGTCTTCACAAAGATATAAGTGAGCTGAATCTACCAAAATCTTGTACCATCCAATTCCCCAATGGCAAAGATGACCTGATGAACTTTGAAGTTTCAATTCGGCCTGATGAAGGATATTATCTAGGTGGCACGTTTTTATTTTCCTTCCAAGTGTCTCCCATCTATCCACACGAGGCACCAAAAGTTAAGTGCAAAACAAAGGTCTACCATCCTAATATTGACTTGGAAGGAAATGTTTGCCTCAACATCTTACGGGAAGATTGGAAACCTGTTCTCAATATAAACACAGTCATCTATGGATTATATCATCTTTTCACGGAACCAAATTATGAGGACCCCCTCAATCATGACGCTGCGGCAGTTTTGAGAGAGAATCCAAAGATGTTTGAGTCTAATGTGAGGAGGGCTATGGTTGGTGGGTATGTGGGGCAAACCTTTTTCCCACGCTGTATGTAA 639 0.4272 MLSCTLRKPPLRFSSFLLFLSAVFLSSRTMIKLFKVKEKQRELAENASGGAPIKKQTAGELRLHKDISELNLPKSCTIQFPNGKDDLMNFEVSIRPDEGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKMFESNVRRAMVGGYVGQTFFPRCM 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0535 212 CDD UBCc 62 196 IPR000608 -
Glsi09g0535 212 Gene3D Ubiquitin Conjugating Enzyme 54 212 IPR016135 -
Glsi09g0535 212 FunFam NEDD8-conjugating enzyme Ubc12 54 212 - -
Glsi09g0535 212 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 86 190 - -
Glsi09g0535 212 SMART ubc_7 61 204 - -
Glsi09g0535 212 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 58 203 IPR000608 -
Glsi09g0535 212 SUPERFAMILY UBC-like 53 210 IPR016135 -
Glsi09g0535 212 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 130 145 IPR023313 -
Glsi09g0535 212 Pfam Ubiquitin-conjugating enzyme 62 197 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0535 Glsi-ChrGlsi09 3702907 3706613 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0535 09 3702907 3706613 Glsi09g0535 09 3702907 3706613 ECH