Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0290 ATGGCCATGACGCCTGAGAAAGACCCGCCATCACCAGCCTTTCTGGACACAGTGGGAGAGATTACGAGAATCTATCGATCGCTGCCACCTAGACCTTCTATTGAAGAAGTCGAAGCTGCCACTTCTACAGTGGAAACTGTGAACGGCGAGGAGAAAATGAAGCTCGACGAAATCTCAATGCAAGAAGTCCCTCACGATGTCCCCGAGGAGCTATTCTCTGTGTTGCAAGAATTGAAGAAGACCGCGGTCTTGTTCCAGAGCCATCAGCACAGGATAGAAGCTCTCCACCTTCTTGAACTGGAAAAAATGTTTCAGACCTTAGGTGATCTTATCCAGAGGGCTTCTGAATTGGTTTCCGGAGACATCCAGGAACAGAAACATCCCAATTTAGCCGAACCAGTTCGAGAAATCGCAAGAGATGTTGTTATTAGTGAAGAAAGTCTGGCGAAGAGAAAGGTAGACGAAGAACCAGAGAAAATTAACTTGAACGTTGAAAAGGGATCCTTCGTGAAGGCGTCTTTCTCCTCTGTGGATGGAAACTCTGAGAAATTAAGTCTCATGAAAGTGGCCACGCTTATTGAAAATTGTGCTAACAGTGGAGCAACAATCCTTGAGCTTAGAGGGAGGCTGGTGGACCAGATGGAATGGTTGCCTCTATCGATTGGGAAACTATCTGAAGCCACTGAACTGGACCTATCTGAAAACAGAATCATGGCACTTCCTTCTACCATTGGGGGTCTCAAGGCCTTAACAAAGCTCGATCTTCACTCGAACCAACTTATAAACCTTCCACACTCTTTTGGGGAATTGATAAACCTCACTGATCTCGATCTCCACGCCAACAGATTGAGATCACTGCCCGCTTCTTTTGGAAACTTGGCTAATCTCGTTAATCTTGACTTGAGTTCAAACGAGTTCACACATTTGCCAGAGACAATTGGGGATTTAAGCAGCTTGAAGAGATTAGATGTTGAGACAAACGAGCTAGTGGAACTGCCTTATACAATCGGAAATTGCTCATCACTCTCAGAGCTGAGGTTAGATTTTAATCAGCTCAAAGCCGTTCCTGAGGCAATTGGGAAGCTTGAATGCTTGGAGATTTTAACTTTGCATTATAACAGAATCAAGGGGTTGCCCACGACAATTGGCAACCTGTGCAATTTGAAGGAACTTGATGTTAGCTTTAATGAACTAGAATTTGTACCAGAGAACCTATGCTTTGCTGCAAGTCTGAAGAAATTAAATGTGGGGAACAACTTTGCAGACCTAAGAGCCTTGCCAAGATCAATTGGAAATCTTGAAATGCTTGAGGAGTTGGATATCAGTGATGATCAAATAAGAGCATTACCGGAGTCTTTCAGGTTCTTGTCGAAATTGAGAGTTTTTCGTGCCGATGAGACTCCTCTGGATGTGCCACCGAGAGAAGTGGTCAAGTTGGGTGCTCAGGAAGTTGTGCAGTATATGGCTGATTATGTCGCCAAGACGGATGCAAAATTTCCGCCATCAAAGAAGAAGAAGAAGAAGGGATTCTGGTTCTGGTTTCGCTCAATATTCTCCTCCCGGCAGAGATGA 1572 0.4466 MAMTPEKDPPSPAFLDTVGEITRIYRSLPPRPSIEEVEAATSTVETVNGEEKMKLDEISMQEVPHDVPEELFSVLQELKKTAVLFQSHQHRIEALHLLELEKMFQTLGDLIQRASELVSGDIQEQKHPNLAEPVREIARDVVISEESLAKRKVDEEPEKINLNVEKGSFVKASFSSVDGNSEKLSLMKVATLIENCANSGATILELRGRLVDQMEWLPLSIGKLSEATELDLSENRIMALPSTIGGLKALTKLDLHSNQLINLPHSFGELINLTDLDLHANRLRSLPASFGNLANLVNLDLSSNEFTHLPETIGDLSSLKRLDVETNELVELPYTIGNCSSLSELRLDFNQLKAVPEAIGKLECLEILTLHYNRIKGLPTTIGNLCNLKELDVSFNELEFVPENLCFAASLKKLNVGNNFADLRALPRSIGNLEMLEELDISDDQIRALPESFRFLSKLRVFRADETPLDVPPREVVKLGAQEVVQYMADYVAKTDAKFPPSKKKKKKGFWFWFRSIFSSRQR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0290 523 SMART LRR_bac_2 247 266 - -
Glsi09g0290 523 SMART LRR_bac_2 270 289 - -
Glsi09g0290 523 SMART LRR_bac_2 293 312 - -
Glsi09g0290 523 SMART LRR_bac_2 408 429 - -
Glsi09g0290 523 SMART LRR_bac_2 316 335 - -
Glsi09g0290 523 SMART LRR_bac_2 433 452 - -
Glsi09g0290 523 SMART LRR_bac_2 385 404 - -
Glsi09g0290 523 SMART LRR_bac_2 224 243 - -
Glsi09g0290 523 SMART LRR_bac_2 339 358 - -
Glsi09g0290 523 SMART LRR_bac_2 362 381 - -
Glsi09g0290 523 SMART LRR_typ_2 270 292 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 224 246 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 362 384 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 293 315 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 340 361 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 247 269 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 385 408 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 433 455 IPR003591 -
Glsi09g0290 523 SMART LRR_typ_2 316 339 IPR003591 -
Glsi09g0290 523 Gene3D Ribonuclease Inhibitor 167 495 IPR032675 -
Glsi09g0290 523 Pfam Leucine rich repeat 341 398 IPR001611 GO:0005515
Glsi09g0290 523 Pfam Leucine rich repeat 272 329 IPR001611 GO:0005515
Glsi09g0290 523 ProSiteProfiles Leucine-rich repeat profile. 272 293 IPR001611 GO:0005515
Glsi09g0290 523 FunFam Plant intracellular Ras-group-related LRR protein 4 183 491 - -
Glsi09g0290 523 PANTHER DISCS LARGE 213 484 - -
Glsi09g0290 523 SUPERFAMILY L domain-like 191 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0290 Glsi-ChrGlsi09 2074258 2076363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0290 220 448 Receptor kinase-like Gene Family AT3G11080 35.443 1.55e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0290 09 2074258 2076363 Glsi09g0290 09 2074258 2076363 ECH