Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0175 ATGATCATAATTACCCCTCCGGTGATATACCCGCCACCAATTTCACCTTCACCACCACACTGGGGTGCTCCTCCGCAGCCAACTTGTCCAATCGATGCGTTAAAGCTAGGGTTTTGCTTGGATATTCTTGGAGGTATTGTGCATGTGGGAATAGGGAACCCAATAGAGAATATCTGCTGTCCCGCGATACAGGGATTGCTTGAGCTGGAAGCAGCCATTTGTCTTTGCACTGTTATTAGGCTTAAGCTTCTCAACCTCCAAATATTCATTCCTCTTGCTCTTCAAGTACTAATAACTTGCGGGATGACACCTCCTCCTGGTTTTGTTTGTCCACCTCTATAA 342 0.462 MIIITPPVIYPPPISPSPPHWGAPPQPTCPIDALKLGFCLDILGGIVHVGIGNPIENICCPAIQGLLELEAAICLCTVIRLKLLNLQIFIPLALQVLITCGMTPPPGFVCPPL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0175 113 Pfam Hydrophobic seed protein 28 111 IPR027923 -
Glsi09g0175 113 CDD HPS_like 27 110 IPR027923 -
Glsi09g0175 113 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 112 IPR036312 -
Glsi09g0175 113 Gene3D - 26 112 IPR036312 -
Glsi09g0175 113 PANTHER - 24 110 - -
Glsi09g0175 113 SMART aai_6 29 110 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0175 Glsi-ChrGlsi09 1310337 1310678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi09g0175 28 112 Acyl Lipid Metabolism Gene Families AT4G22490 34.118 1.04e-09 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0175 09 1310337 1310678 Glsi09g0175 09 1310337 1310678 ECH