Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi09g0171 ATGCGGGTGAAAGAAATGCACCCTTTGTGCTGTATCTCGCTTGAGAGTCCTGGAATCGGAAACCAATCTCCCGAGGCGTCGCTATCCCGGGCTAGGAGTCTGCCTGCCAGTTTCGCGGGGGGCGGATCTGATGGCAATGCCGGTGCACGGTCTCAGGGATCAGAGGCCACCGTGGCCGGCATACTCTACAAGTGGACCAATTACGGCAAAGGGTGGAGATCCCGTTGGTTCCTGTTGAGGAACGGAGTCCTTTCTTATGCTAAGATCCTGTGGCCGGAGAACCTCAATCTTCTTACGCCGACCGATGACGTCAGGTTGATTGGAGAAATTTCCACCAACCGTTTAGCAAGGATGGACAGCGGGAGTACCATTCGACGGAAGCACCAGAGAACTGCTTCTGGCGTAGTCCATCTCAAGATTTCGTCATTTAGAGAAAGCAAGTCAGATGATCGGCGGTTCTATATATTTACTGCTACCAAGACTCTCCATTTGAGAACTGATTCAAGGAAAGATCGGGTAGCGTGGATACAAGCGTTAGTATCTACTCGTAGCTTGTATCCGCTCAGACCACTGAAAGATTCTCTCTTCCTTGTACCGAACGATATATGTTTATCAACCGAGAGCCTTAAGAAGCGCTTGCTTGAAGAAGGAACCAATGAGAACCTTGTAAAGGAGTGCGAGCAAATCATGCTCTCAGAGTACTCAAGAATACAAGGGCAACTTAAAATTCTTTGTGAAGAGCGATCAAATTTGTTTGATACAATAAGACAGTTGGAGGCAGCTAATATTGAAGCTGAGGCCTCTGGAATCCATGATGGTGAATACCAGTTAACAAAGCATGAATTTTTAAGTCTAGGACGTGGAAAATACAGTGAATGCAGTACAACTGAATCATCTGATGATATTGAGAAACAGGAGATGGAAGAAGTGTCAGATGAAGATGAAATATCATATTATGATACTACAGAGTATTTTACAGAACCTGGTTTTAGGTGTGGGTCAACAGGACCTCTGGTACAGGTGGACAAGTCTAGGGAAATGAATGCACAATGCATTGGTGTGGTGAAAATTCAGCCTGAGAAGGCGATCTATAATTCTAGGTATCCTCAGTTAGCAAGACGAAGAAAGCTTCCTGATCCTGTTGAGAAAGAGAAGGGTGTTAGTCTTTGGTCAATGATCAAAGACAACGTGGGAAAAGATCTCTCACGCATTTGTCTTCCTGTCTACTTTAATGAGCCAATATCATCCCTTCAGAAATGTTGTGAGGACCTCGAGTACTCTTACCTGTTGGATCGAGCTTATGAGTATGGAAAATCAGGAAACAGTCTCCTTCGGGCACTGAATGTTGCTGCCTTTGCAGTGTCTGGATATGCATCATCTGAAGGCCGTCATTGTAAACCCTTTAATCCCTTGTTAGGGGAAACTTATGAAGCTGATTTTCCTGAGAAAGGAATTCGTTTCTTTTCTGAGAAGGTCAGTCACCATCCAACTCTCATTGCCTGCCACTGTGAAGGTAGAGGATGGAAGTTTTGGGGTGACAGCAACATCCATTCGAAGTTTTGGGGTAGGTCAATTCAGCTTGACCCAGTGGGAGTTCTGACGCTAGAGTTCGATGATGGTGAAATATTTCAGTGGAGCAAGGTCACAACAACAATTTATAATCTTATCCTTGGCAAAATATACTGTGATCATCATGGGAACATGGACATATGTGGCAATCGCCAATATTCATGTAGACTCAAGTTTAAAGAGCAGTCTATTCTTGACCGAAATCCTCACCAGGTGCATGGATTTGTTGAAGATATTACGGGGAAAAAAGTTGCCACATTATATGGCAAGTGGGATGACAGCATGTATTATATTATTGGTGATGGGAATGTCAAGCCAAAAGATTTCAGTTCATCAGATGCATCTTTGTTGTGGAAAAGGATCAAGCCTCCTACTAATCTCACTCGGTACAATTTGACTTCATTTGCGATTACTTTGAATGAGCTTACACCAGGATTGAAGGAGAAGCTCCCGCCCACGGATTCCAGGCTTAGACCAGATCAGCGGCATCTTGAGAATGGGGAATATGAAAAGGCTAATGTGGAGAAACAAAGGTTGGAAAAGAGGCAAAGAATGTCTAGAAAAATGCAAGAAAATGGTTGGAAGCCTAAATGGTTCCAAAGAGAAGGTGAAAATGGAACGTTTCGTTTTGTAGGCGCGTATTGGGAGGCCAGAGAGGTAGGCAGATGGGATGGATGCCCAAATATATTTGAAGTTAATGGGGACTTTGTCGCTGCCTTAGATGCATCTTGA 2301 0.4424 MRVKEMHPLCCISLESPGIGNQSPEASLSRARSLPASFAGGGSDGNAGARSQGSEATVAGILYKWTNYGKGWRSRWFLLRNGVLSYAKILWPENLNLLTPTDDVRLIGEISTNRLARMDSGSTIRRKHQRTASGVVHLKISSFRESKSDDRRFYIFTATKTLHLRTDSRKDRVAWIQALVSTRSLYPLRPLKDSLFLVPNDICLSTESLKKRLLEEGTNENLVKECEQIMLSEYSRIQGQLKILCEERSNLFDTIRQLEAANIEAEASGIHDGEYQLTKHEFLSLGRGKYSECSTTESSDDIEKQEMEEVSDEDEISYYDTTEYFTEPGFRCGSTGPLVQVDKSREMNAQCIGVVKIQPEKAIYNSRYPQLARRRKLPDPVEKEKGVSLWSMIKDNVGKDLSRICLPVYFNEPISSLQKCCEDLEYSYLLDRAYEYGKSGNSLLRALNVAAFAVSGYASSEGRHCKPFNPLLGETYEADFPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWGDSNIHSKFWGRSIQLDPVGVLTLEFDDGEIFQWSKVTTTIYNLILGKIYCDHHGNMDICGNRQYSCRLKFKEQSILDRNPHQVHGFVEDITGKKVATLYGKWDDSMYYIIGDGNVKPKDFSSSDASLLWKRIKPPTNLTRYNLTSFAITLNELTPGLKEKLPPTDSRLRPDQRHLENGEYEKANVEKQRLEKRQRMSRKMQENGWKPKWFQREGENGTFRFVGAYWEAREVGRWDGCPNIFEVNGDFVAALDAS 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi09g0171 766 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 57 741 IPR000648 GO:0008289
Glsi09g0171 766 SUPERFAMILY Oxysterol-binding protein-like 383 754 IPR037239 -
Glsi09g0171 766 Coils Coil 685 705 - -
Glsi09g0171 766 Pfam Oxysterol-binding protein 388 742 IPR000648 GO:0008289
Glsi09g0171 766 Pfam Pleckstrin homology domain 60 179 - -
Glsi09g0171 766 SUPERFAMILY PH domain-like 54 181 - -
Glsi09g0171 766 Gene3D - 684 742 - -
Glsi09g0171 766 SMART PH_update 56 186 IPR001849 -
Glsi09g0171 766 FunFam Oxysterol-binding protein-related protein 2A 684 755 - -
Glsi09g0171 766 FunFam oxysterol-binding protein-related protein 1D isoform X1 474 645 - -
Glsi09g0171 766 ProSiteProfiles PH domain profile. 55 184 IPR001849 -
Glsi09g0171 766 Gene3D - 474 646 - -
Glsi09g0171 766 Gene3D - 52 185 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi09g0171 Glsi-ChrGlsi09 1280209 1289471 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi09g0171 09 1280209 1289471 Glsi09g0171 09 1280209 1289471 ECH