Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2012 ATGTCTGCAGTCGAAGCGGAGAAGAATGTTGAGGAAGAGAAGGAGGTGGTGAAAGGGGGAGAGCTCTTGTTCTGCGGTGGTACTTGTTGGGATATTATTGGTCGTCGCAGAGGCTCTGCCGAAGCCAACTTGGTCTCTCCAACTCGGCTACGCCCTCTCGTTGGGGTTGATATTCGATTTGTTGCCTCTGGTTGCGCATCTTGTCATTGCGTGGCATTGGATAAAGGGCAACTGGGTCATGGAGATACCATTCAGCGTGATAGGCCAACCGTGGTGTCTGAACTTTCGAAATACAAAATTATCAAAGCTGGAGCAGGGAGGAGCCACTCTGTGGTTGTTACAGAGGATGGACATTCCCTTGCCTTTGGTTGGAATAAGCATGGACAGCTAGGTTCAGGTTCAGCAAGAAATGAAATTGAGTCATCTCCTGTTCGCTGTCTAGTGTCAGAAGTCAAATATACTTCTTGTGGTGGTGACTTCACTGTGTGGTTATCTTCCATTGAAGGAGCTTCTATACTTACTGCAGGGCTTCCACAGTATGGGCAGCTTGGGCACGGAACAGATAATGAGTATAATTCCAAAGACAGCTCTGTGAAGTTGGTTTATGAAGCCCAACCACGTCCTCGGACAATTGCTACACTTGCTGGGGAAACAATTGTCAAAGTAGCATGTGGAACAAATCATACAGTGGCGATTGATAAGAATGGCTTTGTTTACACGTGGGGTTTTGGTGGTTATGGAAGGCTAGGACATAGGGAGCAGAAGGATGAGTGGGTCCCACGTCGTGTTGATGTTTTTCAGAACAGAAATGTTCTACCCCCCGATGCCATGATTTCAGCTGGTTCTGTTAACTCTGCTTGCACTGCAGGTGGAGGGCAATTGTATATGTGGGGAAAAATAAAGAATACAGGTGATGACTGGATGTATCCTAAGCCTCTAATGGATTTAAGTGGCTGGAACATACGATGCATGGATTCAGGCAATATGCACCATTTTGTTGGGGCTGATTCTTCATGCATAAGTTGGGGCCATGCTCAGCATGGGGAGCTGGGATATGGACCTAATGGACAGAAGTCTTCAGCTGTACCCAAAAAGGTGGATATTCTTGAGGGCATGCATGTTATAAGTGTTGCTTGTGGTATGGGTCATTCCATGGTCATTGTTGATAGAACAAATGTTGGTGAGCGACTTGATCAGCTTGATATATATGATGGCAAAGCTTCTGGTGAAGGGAATGAAGTACCTGTAAACAAAAATCCAGTACCTAAACATACTGCAAAAAAGGGTGCAAAAGGTGCTGACAATTCCAAGAAGAGGAAGAAATCAAAAGATTTATCTGACTCAGACGAGGAAGAGGATGCTGAAGAAAGTGATGATAGCGCTGGGGAGCAGGTAAATGGTCGAGCCAAGGAGAAAAGGCAACGGGGTGGAAATTATTCTGGTAAAGGTCGAGGTAAGGCATCCAAAAAATCAGCTGCTGAGGGTAAAGGGTCTGGCCTTGGGCGTAACCGTCCTCCAGTAAATAGGAGCTCTAAATCGTCTCAGGTGAAAGCGGGCAAGAGAGGAAGACCCCGTAAGTCATGA 1584 0.4634 MSAVEAEKNVEEEKEVVKGGELLFCGGTCWDIIGRRRGSAEANLVSPTRLRPLVGVDIRFVASGCASCHCVALDKGQLGHGDTIQRDRPTVVSELSKYKIIKAGAGRSHSVVVTEDGHSLAFGWNKHGQLGSGSARNEIESSPVRCLVSEVKYTSCGGDFTVWLSSIEGASILTAGLPQYGQLGHGTDNEYNSKDSSVKLVYEAQPRPRTIATLAGETIVKVACGTNHTVAIDKNGFVYTWGFGGYGRLGHREQKDEWVPRRVDVFQNRNVLPPDAMISAGSVNSACTAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNIRCMDSGNMHHFVGADSSCISWGHAQHGELGYGPNGQKSSAVPKKVDILEGMHVISVACGMGHSMVIVDRTNVGERLDQLDIYDGKASGEGNEVPVNKNPVPKHTAKKGAKGADNSKKRKKSKDLSDSDEEEDAEESDDSAGEQVNGRAKEKRQRGGNYSGKGRGKASKKSAAEGKGSGLGRNRPPVNRSSKSSQVKAGKRGRPRKS 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2012 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 236 291 IPR000408 -
Glsi08g2012 527 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 222 232 IPR000408 -
Glsi08g2012 527 MobiDBLite consensus disorder prediction 404 527 - -
Glsi08g2012 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 58 116 IPR000408 -
Glsi08g2012 527 Gene3D - 199 394 IPR009091 -
Glsi08g2012 527 MobiDBLite consensus disorder prediction 461 478 - -
Glsi08g2012 527 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 103 113 IPR000408 -
Glsi08g2012 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 117 167 IPR000408 -
Glsi08g2012 527 Pfam Regulator of chromosome condensation (RCC1) repeat 173 232 IPR000408 -
Glsi08g2012 527 Pfam Regulator of chromosome condensation (RCC1) repeat 341 387 IPR000408 -
Glsi08g2012 527 Pfam Regulator of chromosome condensation (RCC1) repeat 235 285 IPR000408 -
Glsi08g2012 527 MobiDBLite consensus disorder prediction 427 447 - -
Glsi08g2012 527 SUPERFAMILY RCC1/BLIP-II 18 390 IPR009091 -
Glsi08g2012 527 Gene3D - 6 198 IPR009091 -
Glsi08g2012 527 PANTHER PROTEIN RCC2 7 504 IPR028641 -
Glsi08g2012 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 170 235 IPR000408 -
Glsi08g2012 527 Pfam Regulator of chromosome condensation (RCC1) repeat 101 129 - -
Glsi08g2012 527 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 377 387 IPR000408 -
Glsi08g2012 527 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 337 390 IPR000408 -
Glsi08g2012 527 PRINTS Chromosome condensation regulator RCC1 signature 222 238 IPR000408 -
Glsi08g2012 527 PRINTS Chromosome condensation regulator RCC1 signature 238 252 IPR000408 -
Glsi08g2012 527 PRINTS Chromosome condensation regulator RCC1 signature 119 135 IPR000408 -
Glsi08g2012 527 PRINTS Chromosome condensation regulator RCC1 signature 100 113 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2012 Glsi-ChrGlsi08 14187184 14192944 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2012 08 14187184 14192944 Glsi08g2012 08 14187184 14192944 ECH