Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g2001 ATGGGAGCTCTTGCTACACTGGCACCGTGGACTCCCGAAGACGACCTTTTACTGAAGAACGCTGTTGAGGCTGGCGCTTCCTTAGAGTCACTTGCCAAAGGTGCAGTGCAGTTTTCTCAAAGATTTACTGTTCGAGAAATACAAGACCGTTGGTACTCTCTCCTCTATGATCCTATTATTTCTGCAGAAGCTTCTGCATGCATGAGTAACTTTGAGTTTGCTGCTTCGCCTCTTCCATCAAAGTTCAGTAAGTTGGGACGATCAAAAGAAAGGAAGTTAGCATCTGCTAAGAGAAAAGCTGAAAGTGTTCGTAGTTCTTATTATGCTATGCGTAAAAGAATCTGCAATGACACATTTACTTCCATGGACTTAAGTTTTATGGTTGGTCTGAAAAATAGCAGTTGTGTAGGAAATGGAGGCGAGCCTTCTCTTGAAAACTGCATGCCTGAAGGTGCTGCCACATATCATTGTAGATCTCAGGGATCAAATTTTGGTCCTATGCACTGTGCTCTTCCTGAAAATATGATGGATGGTAGTGGTGCAAATAATGGAGTTACTGCCTATGCCTTTTACACTGGAGTTGAGAACCCAGTCGAGGAGAGTTTCCATATTGAGCAAAAAAATATACTAAAAGAAGTAGAAGAACCTCAAATTCTTGCAGACAAAGTGCCTTTGAATGGAGGTATTGAGGAATTGGGTGGTCCAAAAGAATTGGCTGTAGATGCCCTGATTGGAGATGATGGGTTAGAGAGAATGCCTTTATCTACATTTGATCAGATTGACAGTGAACCTGGAAATTTGTGTTCTGAGTTTGATGGCTTTGATTCCCCTGCATTAGAGTGTGGAACATCATTTAACACCTTGCAGTTATCTCCACTTCCTGAAATGCCAATATGGAGAACAGACGAGGGCATGCTAGGACCTGATATGCCATGTGATAATTTGGAAAATACCGTTGCTTGTGGGGAGGCTTATTTGGCAGAACTATCCAATTCTCTCTTAGATTTAACTAATGACGAAGAATTTTTTGCGGATGTTGATGGACAGGACGGGTTTGATGAGTCTTACTATGATGGTCTAAGTTCACTTTTATTAAATTCACCAGCTGATATTAGTCAAGATCAGATATCCATAATAGCTGGACCAGAGGCATTGGTGGTTTCACAGGGACATGTTACAAATCCGTCAATTTTGTGTCATGCAGAAATTAATGACAACATAGGGCCATGCTCTAGCGATGTGCAAGTAGTTCGCAAATCAGAGGTCTGTATACCATCTTTTGCTTCTGCTAAAGACCCTCGATTTCCTGAATTAATTAATGGAGTTGTTTGCTGTACTTTAAACACCGAGGACCCAGAAATTCCATCCAATGATGATGTTTTCCTACCTTTTGATGTGCCCCCTTCAACAGTTCCCTCATCGTCTAAATGGACTTTTCAAGAAGCCAATAAACCACTTTTATCATCTGTTGAGGATTTTGGACCTAGTCATAGAGCTGGTGAAAGAGGTATACATCTGGTGCAGGTAGAACAGAAAAACCCTCACATGATGGAATCTCCTCCCCTGCCGGGACCTGTTGGTGGTTCCAATGTAAAATGTGAGTTACCTAATAATCGTTCCTCACATATGACTTCTAGGACTGCAGTTACAGTACATGCAAACCCAAAGGAAGAGGCTACCAATATTGTCTTTGCAAAGCATCAAAGCAATGATTTAAAAAATTCTTCCAATGAGAAACCAGCCCATGGTTCTAATAGCTTTAGAAATTATCCTCACCTCAATGCCTCTGGCATGAAACAGGAACAGGATGTAGTAATACCAATTCAAGATCATCAATCACTGCTTACTGAATTGGGATCATCAGATTTTGTCAGGTCAGAGCTGGTGGCAAACCCTCCAACGTCAGATCGGGAAGAGCAAAATATAGACAGCGATGATGATATTCCTTATTATTCTAATATAGAGGCAATGATACTTGATATGGACTTGGATCCTGATGACCAGGATTTGTATTGTAGTGTGGCAGTATCAAGATATCAACATCAGGACACTAAGAGAGCTATCTTAAGGCTGGAACAGGGTGCTCATTCTTATATGCAAAGAGCCCTTGCTTCACATGGAGCATTTGCCATTTTATATGGTCGCCATTCAAAACATTATATAAAGAAACCTGAGGTTTTACTTGGTCGGGCATCAGAAGATGGTCTTGTTGACATTGACTTGGGAAAAGGAGGGGGTGCAAACAAAATATCTCGACGTCAGGCAATTATAAAGTTGGATAAAGTTGGATATTTCTATCTTAAAAACCTTGGGAGGAGTTCAATCTTGGTAAATAACAAAGAAGTGCATCCTAGTCATTCTCAAAGACTACATTCCAGTTGTCTGATCGAGATAAGGGGAATGCCATTCATATTTGAGACAAATCAAAGTCGTGTGAAGCAGTACCTTGATCGTGTTGCTGAAGATAATCAAACCCCAGAGTGTCAATTGTAA 2493 0.4091 MGALATLAPWTPEDDLLLKNAVEAGASLESLAKGAVQFSQRFTVREIQDRWYSLLYDPIISAEASACMSNFEFAASPLPSKFSKLGRSKERKLASAKRKAESVRSSYYAMRKRICNDTFTSMDLSFMVGLKNSSCVGNGGEPSLENCMPEGAATYHCRSQGSNFGPMHCALPENMMDGSGANNGVTAYAFYTGVENPVEESFHIEQKNILKEVEEPQILADKVPLNGGIEELGGPKELAVDALIGDDGLERMPLSTFDQIDSEPGNLCSEFDGFDSPALECGTSFNTLQLSPLPEMPIWRTDEGMLGPDMPCDNLENTVACGEAYLAELSNSLLDLTNDEEFFADVDGQDGFDESYYDGLSSLLLNSPADISQDQISIIAGPEALVVSQGHVTNPSILCHAEINDNIGPCSSDVQVVRKSEVCIPSFASAKDPRFPELINGVVCCTLNTEDPEIPSNDDVFLPFDVPPSTVPSSSKWTFQEANKPLLSSVEDFGPSHRAGERGIHLVQVEQKNPHMMESPPLPGPVGGSNVKCELPNNRSSHMTSRTAVTVHANPKEEATNIVFAKHQSNDLKNSSNEKPAHGSNSFRNYPHLNASGMKQEQDVVIPIQDHQSLLTELGSSDFVRSELVANPPTSDREEQNIDSDDDIPYYSNIEAMILDMDLDPDDQDLYCSVAVSRYQHQDTKRAILRLEQGAHSYMQRALASHGAFAILYGRHSKHYIKKPEVLLGRASEDGLVDIDLGKGGGANKISRRQAIIKLDKVGYFYLKNLGRSSILVNNKEVHPSHSQRLHSSCLIEIRGMPFIFETNQSRVKQYLDRVAEDNQTPECQL 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g2001 830 SUPERFAMILY SMAD/FHA domain 705 807 IPR008984 GO:0005515
Glsi08g2001 830 ProSiteProfiles Forkhead-associated (FHA) domain profile. 726 782 IPR000253 GO:0005515
Glsi08g2001 830 Gene3D - 675 819 - -
Glsi08g2001 830 SMART FHA_2 725 782 IPR000253 GO:0005515
Glsi08g2001 830 FunFam Microspherule protein 1 669 818 - -
Glsi08g2001 830 PANTHER MICROSPHERULE PROTEIN 1 7 824 IPR037912 GO:0002151|GO:0031011|GO:0071339
Glsi08g2001 830 Pfam FHA domain 727 798 IPR000253 GO:0005515
Glsi08g2001 830 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Glsi08g2001 830 CDD FHA_MCRS1 704 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g2001 Glsi-ChrGlsi08 14097871 14104025 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g2001 08 14097871 14104025 Glsi08g2001 08 14097871 14104025 ECH