Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1972 ATGATGGAGCTTCGGTTCTTTCTGGTTTTCTTAGGTCTCTTGGCGATACTGGAACACAGAATCTTACTCCAAGTAGAAGCAGATGATGGGTTTGTCAAAACAAGAGGCGTGCAGCTTATGCTGAATGGGAGCCCCTACTATGCTAACGGGTTTAATGCCTACTGGCTAATGTACGTGGCCTCTGATCCATCTCAGAGAAACAAGGTCTCATCTACGTTTCAAGAGGCTTCCAATCATGGACTGAACATAGCTAGGACTTGGGCTTTCAGTGACGGTGGATATAAACCACTGCAATACTCTCCTGGATCCTACAATGAGGATATGTTCCAGGGGTTAGACTTCGTTATATCTGAAGCCAGAAGATCTGGGATCAAGCTGGTTTTGAGTTTGGTGAATAACTATGAGAACTTGGGAGGAAAGAAGCAGTACGTGGACTGGGCAAGGAATCAGGGGCAGTCCACGAATTCTGAAGATGATTTTTTCACAAACCCGGTGGTGAAGGGATACTACAAAAACCACATCAAGACTGTACTCACAAGACGTAACAGCCTCACCGGAGTTGCTTACAAAGACGACCCAACTATAATGGCGTGGGAGCTCATGAATGAGATTAGGTGCCCTTCAGATAAATCGGGAAAATCCGTACAGGCTTGGATTACTGAGATGGCAACTTACTTGAAATCCCTAGATGGAAATCACTTGCTGGAGGCTGGTCTGGAGGGTTTCTATGGTCTATCAAAGCAGGAATCTAATCCGAGCTTCCAAGTAGGAACAGATTTCATTGCAAACAACCAGATCCCTGGCATTGATTTTGCTACACTTCACTCATATCCTGATCAATGGTTATCAGGTTCGGGTTATGAAGACCAACTCTCATTTTTGGGTAGGTGGCTGAGCGAGCACATCCAAGATGCACAGAACACCCTTCACAAGCCAATTCTCTTGGCTGAGTTTGGGATGTCAACGAAGAATTTGGGTTCCAACTCAAAGCCAAGGGACCAGCTTTTCAACACGGTATATTCTGCAATCTATTCATCAGCAAGTGATGGCGGAGCAGCCGCTGGTGGCTTATTTTGGCAACTTCTAGCTGAAGGAATGGACTCTTTTCGAGACGGTTACGAGGTAATCTTAGGAGAGAGCCCTTCAACGGCAACTTTGATTGCTCAAGAGTCTCAAAAGTTAAACCGAATTCGGAAGATGTACGCCAGACTCACAGACATGGCCAAGTGGAATAAAGCAAAAGAACAGTGGCGGCGGGATGGCGCAAATGGCAGAAATTGA 1281 0.4582 MMELRFFLVFLGLLAILEHRILLQVEADDGFVKTRGVQLMLNGSPYYANGFNAYWLMYVASDPSQRNKVSSTFQEASNHGLNIARTWAFSDGGYKPLQYSPGSYNEDMFQGLDFVISEARRSGIKLVLSLVNNYENLGGKKQYVDWARNQGQSTNSEDDFFTNPVVKGYYKNHIKTVLTRRNSLTGVAYKDDPTIMAWELMNEIRCPSDKSGKSVQAWITEMATYLKSLDGNHLLEAGLEGFYGLSKQESNPSFQVGTDFIANNQIPGIDFATLHSYPDQWLSGSGYEDQLSFLGRWLSEHIQDAQNTLHKPILLAEFGMSTKNLGSNSKPRDQLFNTVYSAIYSSASDGGAAAGGLFWQLLAEGMDSFRDGYEVILGESPSTATLIAQESQKLNRIRKMYARLTDMAKWNKAKEQWRRDGANGRN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1972 426 Gene3D Glycosidases 27 398 - -
Glsi08g1972 426 Pfam Cellulase (glycosyl hydrolase family 5) 64 338 IPR001547 GO:0004553|GO:0071704
Glsi08g1972 426 PANTHER - 8 421 IPR045053 GO:0004553
Glsi08g1972 426 SUPERFAMILY (Trans)glycosidases 31 386 IPR017853 -
Glsi08g1972 426 FunFam Mannan endo-1,4-beta-mannosidase 6 28 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1972 Glsi-ChrGlsi08 13889849 13892093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1972 7 416 Glycoside Hydrolase AT5G66460 64.508 0.0 554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1972 08 13889849 13892093 Glsi08g1972 08 13889849 13892093 ECH