Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1930 ATGCCAGAACCACTATTCCTATTGCTTCTTACCCTCTCCCTCCTCTTGCTCCCCTGTCTAGCCTCCTCCACCGCCAACAATGCCACCAACGATGCCACTTTTTTCACCCGGCAATTCAAAGAAGCCCCCCAATTCTACAACTCCCCAGACTGCAAATCCATCGCCCACAACACAGACGACGGTAAGTATATATGCTCTGATGAAGCCGTGCATATTGCGATGACCCTCGACACCACTTACATCCGGGGCTCCATGGCAGCTATCCTCTCTGTCCTTCAACACTCGTCCTGCCCCCAAAACATCTTCTTCCACTTCGTCTGTTCCTCCAATGCCTTCCTTCTACGCTCTGCCATTTCCAAATCCTTTCCCTACCTCAAATTCCAGCTCTACCACTTCGATGATTCCACCGTCTCTGGCCTCATCTCCACCTCCATTCGCTCTGCACTGGATTGCCCTCTTAACTATGCTCGCACCTACTTGGCTAACCTTCTACCATTGTGTGTTGGAAGAGTGGTTTACCTGGATTCCGACCTCCTCCTAGTGGATGACATTGGCAGTCTCGCAGCCACCCCACTGGGGGAAAACTCAGTACTGGCAGCCCCTGAGTACTGCAACGCCAATTTCACCTCCTATTTCACTCCCACATTTTGGTCCAATCCCTCGTTGTCCCTAACCTTTGCGGACCGAAAGGCCTGCTATTTCAATACGGGGGTGATGGTGATTGATCTGGAGCGGTGGCGAGCAGGGGATTATACGACCAAGATTGAAGAATGGATGGAGCTCCAGAAGAGGATGAGAATCTACGAGCTGGGTTCATTGCCGCCGTTCCTGCTTGTCTTTGCTGGGAATATAGCTCCGGTGGACCACAGGTGGAACCAACACGGTCTTGGGGGAGACAATTTACGGGGGCTTTGCAGGGATCTGCACCCTGGTCCCGTGAGTCTCTTGCATTGGAGTGGGAAAGGGAAGCCCTGGGCTCGATTGGACGCAAATAGGCCATGCCCTTTGGATGCACTTTGGGCACCTTATGATCTATTACAGACTCCATTTGCTTTGGATTCTTGA 1065 0.5211 MPEPLFLLLLTLSLLLLPCLASSTANNATNDATFFTRQFKEAPQFYNSPDCKSIAHNTDDGKYICSDEAVHIAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHFVCSSNAFLLRSAISKSFPYLKFQLYHFDDSTVSGLISTSIRSALDCPLNYARTYLANLLPLCVGRVVYLDSDLLLVDDIGSLAATPLGENSVLAAPEYCNANFTSYFTPTFWSNPSLSLTFADRKACYFNTGVMVIDLERWRAGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNLRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLQTPFALDS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1930 354 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 71 334 IPR029044 -
Glsi08g1930 354 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 9 347 - -
Glsi08g1930 354 FunFam Hexosyltransferase 71 334 - -
Glsi08g1930 354 Pfam Glycosyl transferase family 8 71 327 IPR002495 GO:0016757
Glsi08g1930 354 SUPERFAMILY Nucleotide-diphospho-sugar transferases 70 345 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1930 Glsi-ChrGlsi08 13680818 13681882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1930 14 352 Glycosyltransferase AT3G50760 69.883 1.35e-178 497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1930 08 13680818 13681882 Glsi08g1930 08 13680818 13681882 ECH