Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1898 ATGAGGAACTCAAACTTGTTTATTGGAATAATTATCTTCAAATTTAGTGCTTTTCATGATTTGCAAGCGAATCAACAGACCTTCGCCATATATGGTGGTGCAATCGGTGTGACGTGTGAGAATGAGATTTTGAAGACTACAAATTGGACCAAGGGCGAAGTTTATATGTCGCGCGATGATGCCACAGGCTGTCGTATCCAGGCGAATGAGCTGGCGATTGTTGGGACCAGGGGCGCACAGCAGCCTAGGTTGGCCCCCTGGACCTGGACAACATTCTTTGCCCAACACGTTTCCATGGCGCTAGTTTCTCTCTCCCCTCTCTCGTCTGCACCTTCTCGACTTCTACTTCACCGGCGAATCTTTCTTTGTACTCAAAGAATCAGTGCTGCTTCTACTTCTGCTTCGGCTACGGATTCGATTTCGCCGTCGCCTTCGAATTTGACGCCGAAAGTCGTGGTCACCAGAGAGCGTGGCAAGAATGCCAAGCTTATGAGTGCTCTGGCTAAACATGAAATTAATTGTTTGGAGCTGCCACTCATTGAGCACACATGGGGACCTGATTTAGATAGACTTCCTTCAGTATTAAGTGATAATGCATTTGACTGGATTGTCATAACATCTCCTGAAGCAGGTTCAGTCTTCCTAGAGGCATGGAGAACTGCTGGGACTCCTCGTGTTAGAGTAGGCGTTGTTGGAGCTGGTACTGCAAGCATTTTCAAGGAAGTTTTGCAGTCATCAAAGCAGTCACTTGATGTTGCCTTTGCACCATCTAAAGCAACAGGGAAGGTTTTGGCTACAGAGCTTCCAAAAAATGGAAATAAATGCACTGTTTTATATCCTGCTTCTGCAAAGGCTAGCAATGATATTGAGGAAGGACTTTCAAACCGTGGATTTGAGGTTACAAGGCTTAATACATACACAACGGTACCAGTTCAGCATGTTGACCAAACAACTTTAAAGGAGGCACTTGCTGTCCCTGTTGTTGCAGTGGCTTCACCATCTGCAGTACGTGCCTGGAAGAATCTTATTTCAGAGTCAGATTGGAGCAAATCCGTTGCATGCATTGGCGAGACAACTGCTGCAACAGCAAAAAGATTAGGCTTCAGAAATGTATACTACCCACCACAACCAGGTCTTGAAGGCTGGGTAGAAAGTATTCTTGAAGCTTTAGGATCACATGCTGAATCATTGAGCTAG 1197 0.4561 MRNSNLFIGIIIFKFSAFHDLQANQQTFAIYGGAIGVTCENEILKTTNWTKGEVYMSRDDATGCRIQANELAIVGTRGAQQPRLAPWTWTTFFAQHVSMALVSLSPLSSAPSRLLLHRRIFLCTQRISAASTSASATDSISPSPSNLTPKVVVTRERGKNAKLMSALAKHEINCLELPLIEHTWGPDLDRLPSVLSDNAFDWIVITSPEAGSVFLEAWRTAGTPRVRVGVVGAGTASIFKEVLQSSKQSLDVAFAPSKATGKVLATELPKNGNKCTVLYPASAKASNDIEEGLSNRGFEVTRLNTYTTVPVQHVDQTTLKEALAVPVVAVASPSAVRAWKNLISESDWSKSVACIGETTAATAKRLGFRNVYYPPQPGLEGWVESILEALGSHAESLS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1898 398 SUPERFAMILY HemD-like 150 391 IPR036108 GO:0004852|GO:0033014
Glsi08g1898 398 CDD HemD 151 386 IPR003754 GO:0004852|GO:0033014
Glsi08g1898 398 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 104 393 IPR039793 GO:0004852|GO:0006780
Glsi08g1898 398 FunFam Uroporphyrinogen-III synthase, chloroplastic 194 300 - -
Glsi08g1898 398 Pfam Uroporphyrinogen-III synthase HemD 164 384 IPR003754 GO:0004852|GO:0033014
Glsi08g1898 398 Gene3D - 194 300 IPR036108 GO:0004852|GO:0033014
Glsi08g1898 398 Gene3D - 301 390 IPR036108 GO:0004852|GO:0033014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1898 08 13448933 13458988 Glsi08g1898 08 13448933 13458988 ECH