Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1887 ATGAAGATACTGGTGACTGGCGCATCTGGTTACCTTGGGGGAAGGCTCAGTAATGCCCTGCTCCGAACGGGGCACTCAGTTAGGATCCTGGTAAGGCCAACCAGTGATCTCTCCGCCCTTCCTTCGCCTTCCGACACCGGAACTCTCGAAATCGTCTACGGCGATATCACGGACTATGCCTCTCTCCTCTCCGCCTGCTCCGGCTGCGACATCGTCTTCCACTTAGCCGCTCTCGTCGAGCCTTGGCTTCCCGATCCCTCTAAATTCTTCTCCGTGAACATTGGAGGATTGAAAAACGTGTTGGAGGCAGTGAAGGAGACAAAGACAGTGGAGAAAATCATTTATACGTCGTCATTTTTCGCTCTGGGGCCAACTGATGGAAGCATTGCCGATGAAAATCAAGTTCATCATGAGAAGTTTTTCTGCACGGAATATGAGAAATCAAAGGTTGCCGCCGATAAGATTGCTCTGCAAGCTGCGTCCGAGGGTATGCCAATAGTGGCGGTTTATCCCGGGGTGATCTACGGACCTGGCAAGGTCACGGCAGGAAATATTGTTGCTCGGCTGATGATAGAACGGTTCAACGGACGATTACCTGGTTACATAGGCTATGGAAATGATAAATTTTCTTTTAGCCATGTTGATGACGTAGTGGAGGGGCACATTGCAGCAATGGAAAAAGGGAAACCTGGTGATAGGTATCTGCTAACAGGTGAAAATGCGTCATTTAAGCATGTTTTTGATGTAGCTGCTGTCATCACTGACACAAAGAAACCGATACTTAATATCCCTTTGTGGGTGATTGAAGCATATGGCTGGTTGTCAGTTCTATTCTCTCGGATCACTGGAAAGCCTCCCCTTATCAGTCCACCGACAGTTCGTGTTTTGAGGCAACGGTGGGAGTATTCCTGCGATAAAGCTAAACGGGAGCTAGGTTATAGACCCAGAAGCTTGAAGGATGGACTTGCAGAGGTGCTATTATGGTTGAAGAGCGTGGGCTCCATAAGCTATTAG 1014 0.4872 MKILVTGASGYLGGRLSNALLRTGHSVRILVRPTSDLSALPSPSDTGTLEIVYGDITDYASLLSACSGCDIVFHLAALVEPWLPDPSKFFSVNIGGLKNVLEAVKETKTVEKIIYTSSFFALGPTDGSIADENQVHHEKFFCTEYEKSKVAADKIALQAASEGMPIVAVYPGVIYGPGKVTAGNIVARLMIERFNGRLPGYIGYGNDKFSFSHVDDVVEGHIAAMEKGKPGDRYLLTGENASFKHVFDVAAVITDTKKPILNIPLWVIEAYGWLSVLFSRITGKPPLISPPTVRVLRQRWEYSCDKAKRELGYRPRSLKDGLAEVLLWLKSVGSISY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1887 337 Pfam NAD dependent epimerase/dehydratase family 3 234 IPR001509 -
Glsi08g1887 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 332 IPR036291 -
Glsi08g1887 337 CDD AR_FR_like_1_SDR_e 3 329 - -
Glsi08g1887 337 PANTHER PROTEIN YEEZ 1 326 - -
Glsi08g1887 337 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 336 - -
Glsi08g1887 337 Gene3D - 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1887 Glsi-ChrGlsi08 13382091 13384451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1887 3 238 Miscellaneous Gene Families AT1G09510 31.373 5.39e-23 95.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1887 08 13382091 13384451 Glsi08g1887 08 13382091 13384451 ECH