Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1883 ATGGAGGATGTTGAAGCGAAGGTGCCTCCCTCAGAATCCTGTTCAATGAGTGCTGAAGAGACACCACTAGTAGAACGCGCTAAAGAGAATTCTGAAGTTATAAATCCACCAGATATTCATTCTTTCACTGAAACTCTAACCGAACAACTTAGTAATGGAAAAGTGGAATCTGGCACACATTTCACAATGACTGAATTAGCGACGTCACCAGATACTTTGGATGGTCAAACTGTAGGACAAGATGCAATTTTTCCTACAGATAATTCAGCTTCAACTTCAAATTCTATGGTTGATGTGATAGAAAGAAGTAATTCAGGAACTGTGATTGAAAATTCTGTACCAGGAGCTGGAGAAGATATCTCTGATAGGCATCAAATGCAAGACAATTGTACTGCTGTCACTTCTGACACTGATGTTCACGATCAGATTATGCTCTTAGATTCCTCTTCTGAAACAATTGATCTGCAGAATGACCACAATGAACTAAAAATTAATCCACCTCAAATAAAGATTGACAATGCTGCTACTGAAGTTTTGGGAACGATTGACACTCCTACACATGCCAAGCAGATTGATGCACAAAGAGGCCATATCGATACAGCAGCTCCATTTGAGTCTGTCAAGGAAGTTGTTTCCAAATTTGGAGGAATTGTAGATTGGAAGGCTCATAAAATCCAGACTGTGGAGAGACGCCAACTTGTAGAGCAAGAACTTGAAAAAGCATATGAGGACATCCCAGGGTACAGAAAACAATCAGAGGCTGTTGAAGAGGCAAAAATCCAAGTATTAATGGAGCTGGACAGCACTAAGAGATTAATAGAAGAACTAAAACTAAACCTAGAGAGGGCACAAACAGAAGAGCGCCAGGCAAGACAAGACTCGGAACTTGCAAAGCTCAGAGTGGAAGAGATGGAGCAGGGTATTGCCGATGAATTTAGTGTTGCAGCCAAGGCACAACTTGAGGTGGCTAAAGCCAGGTATACAGCAGCTGTTTCAGAGTTAATATTTGTAAAAGAAGAGCTGGAAGCATTGCGCAAGGAATATGCTTCCTTAGTAACTGAAAAAGATATAGCTATTAAGAAAGCTGAAGAGGCTGTTATTGCATCAAAGGAAGTAGAGAAGTCAGTGGAAGATTTGACTATTGAGCTAATTGCCGCAAAGGAGTCATTGGAGTCTGCACATGCCACACACTTGGAAGCAGAGGAACAAAGAATAGGAACAGTCATGGCTAGAGATCAAGATTCTCTCAACTGGGAGAAGGAACTTAAACAGACAGAAGAGGAGCTCCAGAGACTTAACCAGCAAATCTTGTCAGCAAAGGATCTCAAATCTAAACTGGACACGGCCTCTGCTTTGCTACTTGATTTGAAAGCTGAATTGGCTGCTTATATGAAATCAAAGTTGAAGCAGGAAGGTGATGAAGAAGGAATCTTAAATGGAGACCTAAAGGAACCAGAGACAAAGACACACGCTGAAATACAAGCAAGAGTGACATCAGCCAAAAAGGAACTTGAGGAAGTAAAGCTCAACATGGAAAAAACATCTGCTGAGGTTAATTGCTTGAAAGTGGCTGCCGCATCACTAAAATCAGAACTTGAACAAGAGAAATCAACTCTAGCCACCATTAAGCAAATAGAGGGAATGGCATCCATTGCAGTTGCATCCCTTGAAGCTGAACTGGATAAGACTAGATCAGAAATTGCTTTGGTACAGATGAAAGAGAAAGAAGCCAGAGAGAGAATGATTGAGCTACCCAAGAAACTACAAGAAGCAGCTGAAGAGGCTAATCAGGCCAACTTGCATGCTCAAGCAGCTCGTGAAGAGCTGCGTAAAGTAAAGGAGGAGGCAGAGCAAGCCAAGGCTGGAGCAAGTACAGTGGAAAGCAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTGCCAGGGCTTCTGAGAAGTTCGCGATAGCAACAATTAAAGCGTTGCAAGAGAGCGAATCAGCTAGAAGCAATAGTGTTATGGAGCCATCCACTGGGGTGACACTTTCTTTGGAGGAGTACTATGAGCTTAGCAAACGGGCCCATGAGGCAGAAAAGCAAGCCAATATGAGGGTTGCAGCTGCTAATTCTGATGTTGAAATTGCTAGGCAGTCTGAATTGAAAACCTTGGAGAGATTGGAAGAAGTGAATCAAGAGATGTCTGTCAGAAGGGAATCTTTGAAGATGGCGATGGATAAAGCTGAGAAGGCAAAGGAAGGAAAATTAGCTGTAGAACAAGAGTTAAGAAAGTGGAGGGCTGAACATGAGCGACAAAGAAAGGAAGGTGAGTCTAACCAGAATAAAAGCCCCAGGGTTAGTTTTGAGGCGAGTAAGGAAGTAAATCACTTAGAAAAAGTTCCTGGGGAGGCTAGTCCTGTTCATTACTTGTCAAGCCCAAAGGCTTACGCACACGCAAACAATGCTGCTCCTGGATCATCTCCGGAAACAAAGAATGGTAAGAAGAAGAAGAAGTCATTTTTCCCTCGTATTTTAATGTTCTTTGCTAGAAGAAAAACACATTCAACCAAGACCGTGTAA 2553 0.423 MEDVEAKVPPSESCSMSAEETPLVERAKENSEVINPPDIHSFTETLTEQLSNGKVESGTHFTMTELATSPDTLDGQTVGQDAIFPTDNSASTSNSMVDVIERSNSGTVIENSVPGAGEDISDRHQMQDNCTAVTSDTDVHDQIMLLDSSSETIDLQNDHNELKINPPQIKIDNAATEVLGTIDTPTHAKQIDAQRGHIDTAAPFESVKEVVSKFGGIVDWKAHKIQTVERRQLVEQELEKAYEDIPGYRKQSEAVEEAKIQVLMELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADEFSVAAKAQLEVAKARYTAAVSELIFVKEELEALRKEYASLVTEKDIAIKKAEEAVIASKEVEKSVEDLTIELIAAKESLESAHATHLEAEEQRIGTVMARDQDSLNWEKELKQTEEELQRLNQQILSAKDLKSKLDTASALLLDLKAELAAYMKSKLKQEGDEEGILNGDLKEPETKTHAEIQARVTSAKKELEEVKLNMEKTSAEVNCLKVAAASLKSELEQEKSTLATIKQIEGMASIAVASLEAELDKTRSEIALVQMKEKEARERMIELPKKLQEAAEEANQANLHAQAAREELRKVKEEAEQAKAGASTVESRLLAAQKEIEAARASEKFAIATIKALQESESARSNSVMEPSTGVTLSLEEYYELSKRAHEAEKQANMRVAAANSDVEIARQSELKTLERLEEVNQEMSVRRESLKMAMDKAEKAKEGKLAVEQELRKWRAEHERQRKEGESNQNKSPRVSFEASKEVNHLEKVPGEASPVHYLSSPKAYAHANNAAPGSSPETKNGKKKKKSFFPRILMFFARRKTHSTKTV 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1883 850 Coils Coil 266 302 - -
Glsi08g1883 850 Coils Coil 553 580 - -
Glsi08g1883 850 MobiDBLite consensus disorder prediction 758 829 - -
Glsi08g1883 850 Coils Coil 588 629 - -
Glsi08g1883 850 Coils Coil 715 766 - -
Glsi08g1883 850 Coils Coil 327 361 - -
Glsi08g1883 850 Coils Coil 490 545 - -
Glsi08g1883 850 MobiDBLite consensus disorder prediction 1 38 - -
Glsi08g1883 850 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 196 843 - -
Glsi08g1883 850 Pfam Weak chloroplast movement under blue light 195 763 IPR008545 -
Glsi08g1883 850 Coils Coil 415 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1883 Glsi-ChrGlsi08 13325928 13330190 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0328 10 2139045 2146151 Glsi08g1883 08 13325928 13330190 CCT
Glsi08g1883 08 13325928 13330190 Glsi08g1883 08 13325928 13330190 ECH