Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1845 ATGAGCAATGGGGTATTGACTATTTGGACCAATGATGTCTGTGTGTTTAAAACAGTGATTCTTTTAGGGCCAAAACGCAAGACCATGATTCTTTCCGAGCACCTACTCATCGTCTGTGAATCTCACAATAGCACACGACACTTACACACAACCAAACAAGTTAGGGTAGTGAGAAGCAAGGGAGAGGGAGAAATGGGGGGTTGGGCTATAGCGGTGCATGGTGGCGCTGGTGTGGACCCTAATCTCCCACCCCAGCGTCAAGAACAAGCCAAGCAACTCCTTTCCCGCTGTCTCAATCTTGGCATCTCTGCTCTTCATTCCAATCTTTCCGCCATTGATGTTGTTGAACTCGTCGTGAGAGAACTGGAAACAGATCCGTTGTTCAACTCTGGCCGGGGATCTGCGCTGACAGAGAAAGGGACAGTGGAAATGGAGGCCAGCATCATGGATGGTACCAAAAGAAGATGCGGTGCCGTATCGGGCCTTACCACCGTAAAAAACCCGATCTCACTTGCCCGGCTAGTCATGGATAAATCCCCTCATTCCTATCTCGCTTTCTCCGGTGCCGAAGAATTCGCAAGGCAACAGGGTGTGGAGCTTGTGGACAATGACTACTTCATCACTCCTGAAAATGTGGGTATGCTGAAGCTGGCAAAGGAAGCCAACACTATTCTGTTTGATTACAGGATCCCGACCGGTGGATACGAGACCTGCGGTGCAGGGATCGAGAGTCCATTGCAAATGAACGGACTGCCCATCAGTGTATATGCGCCCGAGACAGTTGGATGCGTGGTGGTGGACAGTCAGGGAAGGTGTGCGGCTGCCACGTCCACAGGAGGGCTGATGAACAAAATGACCGGTCGGATCGGTGACTCACCCTTGATCGGTGCTGGGACCTACGCTGGTGAGTTGTGTGGGGTGTCATGTACTGGGGAGGGGGAGGCCATCATACGTGGCACACTGGCGCGTGAAGTGGCGGCGGTCATGGAGTACAAAGGTCTGGGCCTTCAGGAAGCTGTGGACTTTGTAATAAAGGAAAGGCTGGACGAAGGGATGGCTGGGTTGATAGCCGTGTCCAATAAGGGGGAAGTGGCCTATGGGTTCAACTGTAATGGTATGTTTAGGGGCTGCGCCACCCAGGATGGGTTCATGGAGGTTGGAATCTGGGAATAG 1173 0.5234 MSNGVLTIWTNDVCVFKTVILLGPKRKTMILSEHLLIVCESHNSTRHLHTTKQVRVVRSKGEGEMGGWAIAVHGGAGVDPNLPPQRQEQAKQLLSRCLNLGISALHSNLSAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGTKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEEFARQQGVELVDNDYFITPENVGMLKLAKEANTILFDYRIPTGGYETCGAGIESPLQMNGLPISVYAPETVGCVVVDSQGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYAGELCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQEAVDFVIKERLDEGMAGLIAVSNKGEVAYGFNCNGMFRGCATQDGFMEVGIWE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1845 390 FunFam Isoaspartyl peptidase/L-asparaginase 260 390 - -
Glsi08g1845 390 PANTHER L-ASPARAGINASE 68 376 IPR000246 GO:0016787
Glsi08g1845 390 Pfam Asparaginase 68 389 IPR000246 GO:0016787
Glsi08g1845 390 CDD Asparaginase_2 69 382 - -
Glsi08g1845 390 Gene3D (Glycosyl)asparaginase 260 390 - -
Glsi08g1845 390 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 68 387 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1845 Glsi-ChrGlsi08 13053218 13055700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1845 70 350 Miscellaneous Gene Families AT4G00590 27.303 9.73e-18 82.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0377 10 2452709 2454365 Glsi08g1845 08 13053218 13055700 CCT
Glsi08g1845 08 13053218 13055700 Glsi08g1845 08 13053218 13055700 ECH