Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1797 ATGTCATGGCTGGCTCGCTCTCTGGCAAACTCCCTCCGACTCGATGACGATGACGATAATGGTGAAGCAGACAATGATGAAGATTCCGACGTTGTACCCAATCATCTACATGACCCTCCGTCTACTTCTCCGACAAATCACGAACCCCATCATTACCTGCAGCATCATCAACCACACCAACATTCGCAACACAATGAACTTGGATCAGAAAATGAAGCGCACATTCGAGGAGCCCAAGAGGACCTTAACGTATTCAAGCAAACTCTAACCCGTCAATTCTGGGGAATGGCATCCTTCCTGGCTCCCCCGCCAACAGATTCCCACCCTTCCTCTCTCTTTCATCACCACATCCTATCTGATCCCGCTGCATTCACTTGTCATCAATCAGAGCTTCCTGATCAGCGTGTTTCTGAACACGGTGAAGAATTAGAGGCACAAGCGAATCGGAGATACTCTTCCGACATCGAACAAGGTAGTTTTAGGAGGGAACCTCCAGAAACTTCGGGTATGGAATCATTTGGATCGGAGTCTGTAGTAAACGAGGAAATGGAGGAGTGTCATATTGAACGCGCGGTTGGAATTACAGATGAGGTGTTGGCCTTCGCGAGGAACATCGCGATGCATCCCGAGACGTGGTTGGACTTCCCTATTGAAGAAGAAGAAGACACGGTTGATTTTGACATGTCCGATGCCCAACAAGAGCATGCTTTGGCCATTGAAAGACTTGCTCCTAGATTAGCTGCGCTCAGAATTGAGCTGTGTCCTTGCCATATGAGTGAAAGTTACTTTTGGAAAGTCTATTTTGTACTTTTGCATTCAAGGCTCAATAAACAAGATGCTGGGGTTTTGTCTACACCCCAGGTTATGGCAGCCAGAGCAATGTGGATGCACGAGTTACAGAAGCAAATGAAGCTTGAATCCGAATGGTTTGGAAGGAGCACTTCCAACTCAAGAGACACTTCTCGGCATGAGGATTTTGCTTCCAGTTTATCAGATAATGCCTATTCTGGTGATATGCCTCGCGGGACAAGTGCGACAACTTTGTCCCTGAAGGCAGATTATGAGACTGAGAAGCACACGGTTGAAAGTTCTGAAACACGTTTCATCGATAAGTCAGTTATTGAAGAAAGCCCAATAATTAAAACTGAGGGCAAGGATCTAATAAGTGGTCAATCCTCAAAAATGATTCTTCAGGACTATGAAGATGATGAGGATGAATGGCCAGAGGAAGATGCTGAATTAGGGCGCTGTGATGGAACCACCATCCCCATGGTGAATGAAGAAGACATATCTTTCAGTGATCTCGAGGATGATAATTATTCGGTGACACCTGTTAAATCCAATACAGATTCAAAAGTGCTATGA 1365 0.4571 MSWLARSLANSLRLDDDDDNGEADNDEDSDVVPNHLHDPPSTSPTNHEPHHYLQHHQPHQHSQHNELGSENEAHIRGAQEDLNVFKQTLTRQFWGMASFLAPPPTDSHPSSLFHHHILSDPAAFTCHQSELPDQRVSEHGEELEAQANRRYSSDIEQGSFRREPPETSGMESFGSESVVNEEMEECHIERAVGITDEVLAFARNIAMHPETWLDFPIEEEEDTVDFDMSDAQQEHALAIERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDAGVLSTPQVMAARAMWMHELQKQMKLESEWFGRSTSNSRDTSRHEDFASSLSDNAYSGDMPRGTSATTLSLKADYETEKHTVESSETRFIDKSVIEESPIIKTEGKDLISGQSSKMILQDYEDDEDEWPEEDAELGRCDGTTIPMVNEEDISFSDLEDDNYSVTPVKSNTDSKVL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1797 454 MobiDBLite consensus disorder prediction 1 69 - -
Glsi08g1797 454 Pfam BSD domain 225 279 IPR005607 -
Glsi08g1797 454 MobiDBLite consensus disorder prediction 133 161 - -
Glsi08g1797 454 MobiDBLite consensus disorder prediction 133 173 - -
Glsi08g1797 454 Gene3D BSD domain 190 283 IPR035925 -
Glsi08g1797 454 MobiDBLite consensus disorder prediction 431 454 - -
Glsi08g1797 454 SUPERFAMILY BSD domain-like 193 279 IPR035925 -
Glsi08g1797 454 SMART wurzfinal6 223 275 IPR005607 -
Glsi08g1797 454 MobiDBLite consensus disorder prediction 310 342 - -
Glsi08g1797 454 MobiDBLite consensus disorder prediction 436 454 - -
Glsi08g1797 454 MobiDBLite consensus disorder prediction 327 342 - -
Glsi08g1797 454 MobiDBLite consensus disorder prediction 49 69 - -
Glsi08g1797 454 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 440 - -
Glsi08g1797 454 ProSiteProfiles BSD domain profile. 220 275 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1797 Glsi-ChrGlsi08 12771408 12776006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1797 193 273 EF-hand Containing Proteins AT1G69030 30.769 7.06e-08 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1797 08 12771408 12776006 Glsi08g1797 08 12771408 12776006 ECH