Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1787 ATGGCACCCTTGTTCAATTGGTGGGCGAAAGAGAGACACCGGGGAACCCCTGTGGTGGTGAAAATGGAGAACCCCAATTGGTCCATGGTTGAGCTTGAAGGTCCTTCAGAGGACGACTTTCTCATTTCCGACCCATCTGGTCGTCCAAGAGACAAGGGCAGAGGCAAAAATGCGAAGCAACTTACTTGGGTTCTTCTCCTGAAAGCCCACAGAGCCGCAGGTTGCTTGACCTCCATTGCCCCCGCATTGTTCGGCCTAGCCTCAGCTGTGAAGCGCCGCGTAGCCTCCGGAAGAACGGATGCCGATGCCGACAACGATAACGAAACCCGTGGTGGCAGGGAAAACGAGAACCCCACTGTGAAAAGCAGGTTTTATTCGTGTATAAAAGTATTTCTATGGTTGTCTGTGCTTCTGCTGGGTTTCGAGGTGGCTGCCTACTTTAAAGGTTGGCATTTTGGTGCTCCTCATCTCCAATTGGACTATTTGTGGGTAGCCTCATTTGGAGTTAAAGGTGTTTTTGATTGGCTGTATTCGCGGTGGGTTTTGATTCGGGTGGAGTATCTAGCTCCTCCTCTGCAGTTCCTAGCCAATGTGTGTATTGTGCTATTCCTTATTCAGAGTTTGGATAGACTAATTTTATGTTTCGGTTGTTTTTGGATTCGATTTAAGAAGATCAAACCTGTTCCAAGAGAAGGTGCTGTAGATCTAGAGTCTGGAGAGAAAGGTTTTTTCCCCATGGTTCTAGTGCAGATCCCCATGTGTAATGAGAGGGAGGTTTATCAGCAATCAATTGCTACTGTTTGTAATTTGGATTGGCCAAAATCCAAGTTGCTAATTCAAGTTCTTGATGATTCGGATGATCCAACAACACAAGTGCTGATCAAAGAAGAGGTCCAAAAATGGCAGCAAGGGGGTAACAACATTTTATATCGGCATCGGGTAATTAGAGACGGTTACAAGGCCGGTAATCTCAAGTCTGCCATGAATTGTAGTTATGTGAAAGACTACGAATTCGTTGCTATTTTTGATGCTGATTTTCAGCCTGCCCCAGATTTCCTTCGGAGAACAGTTATTCATTTCAAGGATAACGAAGAATTAGGGCTAGTTCAAGCAAGATGGTCCTTTGTGAACAAGGATGAGAACCTGCTAACAAGGTTGCAGAACATTAATTTGACATTCCATTTTGAGGTGGAACAGCAAGTAAACGGTGTTTTCATTAATTTCTTTGGGTTCAATGGAACGGCTGGAGTGTGGAGAATCAAGGCTTTAGAGGATGCTGGTGGGTGGTTGGAAAGGACGACAGTTGAGGACATGGACGTAGCTGTTCGAGCTCATCTTCATGGATGGAAATTTATTTTCCTCAATGACGTTGAGTGCCAGTGTGAAGTACCCGAGTCTTATGAAGCTTACAGGAAACAGCAGCATAGATGGCATTCTGGGCCAATGCACCTATTCCGCCTCTGTTTGCCCGACATCATAGGGTCTAAGATAAGCGTATGGAAGAAATTCAATATGATATTTCTCTTCTTTCTTTTAAGAAAACTGATATTACCCTTCTATTCATTTACCCTGTTCTGTATAATTCTGCCTATGACAATGTTTGTTCCAGAGGCTGAGCTTCCGGAATGGGTTGTATGTTATATCCCTGCAATCATGTCATTTCTGAACATCCTTCCAGCCCCAAAATCCTTCCCCTTTATTGTACCTTACCTTCTTTTTGAGAATACCATGTCAGTTACCAAATTCAACGCCATGATCTCTGGTCTATTCCAGCTTGGTAGTGCATACGAGTGGGTTGTCACAAAGAAATCTGGTCGTTCCTCTGAGGGTGATCTTGTTGCATTGGTTGAGAAAGGAGCAAAGCATCAAAGAGGGGCGTCGGTGCCTGATCTTGAGGAAATGAAGGAGGAAATCCAACGACAGGAAAAGGCGTCTAAGAAGAAGAGGAAGCATAACAGACTATATATGAAGGAGCTTGCCTTGGCTTTTCTACTTTTAACGGCAGCAGCAAGGAGTCTTCTCTCTGCTCAGGGAATCCACTTCTACTTCTTGCTATTTCAAGGAATATCCTTCCTCTTAGTTGGTTTAGACTTGATTGGTGAACAGGTCGACTGA 2115 0.4454 MAPLFNWWAKERHRGTPVVVKMENPNWSMVELEGPSEDDFLISDPSGRPRDKGRGKNAKQLTWVLLLKAHRAAGCLTSIAPALFGLASAVKRRVASGRTDADADNDNETRGGRENENPTVKSRFYSCIKVFLWLSVLLLGFEVAAYFKGWHFGAPHLQLDYLWVASFGVKGVFDWLYSRWVLIRVEYLAPPLQFLANVCIVLFLIQSLDRLILCFGCFWIRFKKIKPVPREGAVDLESGEKGFFPMVLVQIPMCNEREVYQQSIATVCNLDWPKSKLLIQVLDDSDDPTTQVLIKEEVQKWQQGGNNILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPAPDFLRRTVIHFKDNEELGLVQARWSFVNKDENLLTRLQNINLTFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDAGGWLERTTVEDMDVAVRAHLHGWKFIFLNDVECQCEVPESYEAYRKQQHRWHSGPMHLFRLCLPDIIGSKISVWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPEWVVCYIPAIMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVALVEKGAKHQRGASVPDLEEMKEEIQRQEKASKKKRKHNRLYMKELALAFLLLTAAARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1787 704 Coils Coil 631 651 - -
Glsi08g1787 704 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 464 IPR029044 -
Glsi08g1787 704 Pfam Glycosyl transferase family group 2 339 534 IPR001173 -
Glsi08g1787 704 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 179 701 - -
Glsi08g1787 704 FunFam probable xyloglucan glycosyltransferase 5 238 463 - -
Glsi08g1787 704 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 523 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1787 Glsi-ChrGlsi08 12697014 12699534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1787 1 704 Miscellaneous Gene Families AT4G07960 78.462 0.0 1095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1787 08 12697014 12699534 Glsi08g1787 08 12697014 12699534 ECH