Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1763 ATGATGCACCCCGGGACCTCCCCTTACGATCTCGATCGCTTCGGCATCATTTTCAGGCCCAGCCCCCGCCAGTCCGATTGTAAGATTGTTGCCGGCACTCTCACCAATAAGCTCTTTCCTGTTTCTCTTTCAGTAGGAGTCTTCACGCCAAGCTTGAAGGCTAATGCAGGAAGCAGTATCATTGACTGGCCCTTTTCTAGAACATCTACAGGAATGTTGGCAGTTCATGTTCTTGGTGTGTTGGATATTTCAACTAGAGATGCAACACTGATTTTTATGGTTTATGACCAAATGCCCGAGCCTAGGGTTTCTTCTGTTCATCTGCCAAGAAATCCAATGGCCGACGAAGCTCAGTATTCCTCGGGCACAGAGACCACACCCCATAAGCGCAAGTACGAAGAGCCATCGCTTCCACAATCCACTACTCACAGGCCCACTGGTTTCTCTGCGCCCATCGCGTCTCCATCTCCCGATGGTGCTCACGCGCCGCCTCCCTCCTACAACAGCGTGCCTCCCCCCGCGGCAACTGGAATTGAGCTTGCCAAGCAGCGTGCTCAGGAGGTTGCTGCTCGCCTCTTAAACAATATTAGTAGTGGAGCTGGTGGGCTGGACGCCAAGCGACCCAAGGTCGATAATGGTGCTACTGGGTTTGATTCCATTGATTCGAAGCCTCAATACTCAGCCCCTTCAACTGCGCCCATTGTTTATGCCTATCAGGGTACGAGCAAAAAGATAGACATCCCTAATGGAAGGGTCGGCGTTATTATTGGTAAAGGTGGGGAGACGATCAAATATCTTCAAACGCAGTCTGGAGCGAAGATCCAAGTTACCCGTGATATGGACGCGGACCCGAATTCTCCAACTAGGATGGTAGAACTTATGGGTTCTCCAGATCAAATTTCAGCGGCTGAGAAATTGATAAACGAAGTTCTTGCTGAGGCTGAATCTGGGGGTTCTGGTATTGTTGCTCGACGACTGACTGGACAAACAGGGTCTGAGCAATTTGTGATGCAAATCCCAAATAATAAGGTTGGCCTTGTGATTGGTAAAGGAGGAGAAACAATAAAGAATATGCAAGCTCAGACTGGAGCACGAATTCAGGTGATACCTTTGCATCTTCCCCCAGGTGACACATCGACAGAAAGAACATTACAAATTGATGGGACTGGTGAACAAATTGAATCTGCAAAACAGTTGGTTAATCAAGTCATTAGTGAGAATCGTTTAAGAAATCCATCAATGTCTGGTGGTTATCCTCAACAAGGTTACCAAGCCCGACCACCCTCTAGCTGGGTTCCCCCTGGTGCTCCTATGCAACAACCTGGCTATGGCTATGTGCAGCCTGGAGCATACTCTGGTCCGTCACCCCAGTATAACATGCCTCAGCCACCATATCCAGGCTATCCTCCCCAGTCATCTGGTGGATATTCCACTAATTGGGACCAGTCCACTGTACCACCTCCCCAGCAGTCTACTCATGGTGGTGGGGGTTATGATTATTACAGTCAACAGCCACTATCACAGCAACAGCAAAATCCTGGAGGTCCTGCTCCTGCAGCTGATGGGACTGCTTACAATTATGGTCAGCCACCTTCCTCTGGGTATAACCAACCTGGACAGGGTTATGCCCAGGACAGCTATGGTGGGTATAATCCACCACCACAATCAGGGTATGGTCAGCCACCAACATATGATCAGCAGCAAGGCTATGGCTCAGCTCCCAGCTATGGTAGTGGGAGCAACCCGGCCCACGAGGGCCACACTCCCAACTATGGATCACAAGGGGACTCAACCCAAGCTCCTCCAGCTGTACAAACTTCTTCAGTGTCCCAGCAAGGTTATGGTACCAACCAGCAGCCCAGTCCAAACCCAGCCAACTATCCAACCCAAGGAACTGCTCAGCCAGGGTATGGTATGCCCCCGACTTCCCAAGCAGCTTATGGCAGTCAACCGCAAGTACAGTCTGGTTATGGAACTGGTTATGGACCCCCTCAACCTCAAAAGCCTAGTGGTACTCCTGTTTATGGACAGTCCACACAGTCTCCTAGCACGGCAGGAGGCTATGGTCAATCTGGCCAATTGCAACCTGGGTATCCTGCTCAGCCCCCACCTTCTGGGTATGCCCAACCGGAATCTGGTTCTCAAAGAGCACCACCATCTGGTTTTGGTTCTGCAGTGCAACCAGGGTATGGTCCCCCATCATATGGTGCTCCTCCAGCTGGTCAGCCTGGTTATGGTCAGGCACCACCATCATACAACAGTGGTCCTTATGCTGCTGGTTACTCTCAGCCTCCAGTATATTCTAGTGATGGTAATGGTGCACCTGCGCAAGCTGCTCAGCCGGGCAGCGTTGCTAAAGCATCACCACAGAGTTGA 2376 0.5088 MMHPGTSPYDLDRFGIIFRPSPRQSDCKIVAGTLTNKLFPVSLSVGVFTPSLKANAGSSIIDWPFSRTSTGMLAVHVLGVLDISTRDATLIFMVYDQMPEPRVSSVHLPRNPMADEAQYSSGTETTPHKRKYEEPSLPQSTTHRPTGFSAPIASPSPDGAHAPPPSYNSVPPPAATGIELAKQRAQEVAARLLNNISSGAGGLDAKRPKVDNGATGFDSIDSKPQYSAPSTAPIVYAYQGTSKKIDIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDADPNSPTRMVELMGSPDQISAAEKLINEVLAEAESGGSGIVARRLTGQTGSEQFVMQIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSTERTLQIDGTGEQIESAKQLVNQVISENRLRNPSMSGGYPQQGYQARPPSSWVPPGAPMQQPGYGYVQPGAYSGPSPQYNMPQPPYPGYPPQSSGGYSTNWDQSTVPPPQQSTHGGGGYDYYSQQPLSQQQQNPGGPAPAADGTAYNYGQPPSSGYNQPGQGYAQDSYGGYNPPPQSGYGQPPTYDQQQGYGSAPSYGSGSNPAHEGHTPNYGSQGDSTQAPPAVQTSSVSQQGYGTNQQPSPNPANYPTQGTAQPGYGMPPTSQAAYGSQPQVQSGYGTGYGPPQPQKPSGTPVYGQSTQSPSTAGGYGQSGQLQPGYPAQPPPSGYAQPESGSQRAPPSGFGSAVQPGYGPPSYGAPPAGQPGYGQAPPSYNSGPYAAGYSQPPVYSSDGNGAPAQAAQPGSVAKASPQS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1763 791 ProSiteProfiles Type-1 KH domain profile. 240 307 - -
Glsi08g1763 791 MobiDBLite consensus disorder prediction 671 696 - -
Glsi08g1763 791 MobiDBLite consensus disorder prediction 157 171 - -
Glsi08g1763 791 MobiDBLite consensus disorder prediction 471 516 - -
Glsi08g1763 791 MobiDBLite consensus disorder prediction 408 791 - -
Glsi08g1763 791 ProSiteProfiles Type-1 KH domain profile. 332 400 - -
Glsi08g1763 791 MobiDBLite consensus disorder prediction 103 174 - -
Glsi08g1763 791 SUPERFAMILY HydA/Nqo6-like 1 41 - -
Glsi08g1763 791 MobiDBLite consensus disorder prediction 408 427 - -
Glsi08g1763 791 Gene3D K Homology domain, type 1 330 427 IPR036612 GO:0003723
Glsi08g1763 791 Gene3D K Homology domain, type 1 236 329 IPR036612 GO:0003723
Glsi08g1763 791 MobiDBLite consensus disorder prediction 707 721 - -
Glsi08g1763 791 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 232 597 - -
Glsi08g1763 791 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 328 410 IPR036612 GO:0003723
Glsi08g1763 791 FunFam KH domain-containing protein 328 427 - -
Glsi08g1763 791 MobiDBLite consensus disorder prediction 560 661 - -
Glsi08g1763 791 Pfam KH domain 336 401 IPR004088 GO:0003723
Glsi08g1763 791 Pfam KH domain 244 309 IPR004088 GO:0003723
Glsi08g1763 791 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 237 317 IPR036612 GO:0003723
Glsi08g1763 791 MobiDBLite consensus disorder prediction 526 553 - -
Glsi08g1763 791 SMART kh_6 239 312 IPR004087 GO:0003676
Glsi08g1763 791 SMART kh_6 331 405 IPR004087 GO:0003676
Glsi08g1763 791 Gene3D - 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1763 Glsi-ChrGlsi08 12536862 12550339 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1763 08 12536862 12550339 Glsi08g1763 08 12536862 12550339 ECH