Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1739 ATGGAGGAAGGCTTCCATAGAAGCAAATTCAAGAAGGTTTGTGTCTTCTGCGGCAGCAACTCCGGCAACAGAAAAGTCTTCAGTGACGCTGCGATTGATTTGGGCCATGAACTGGTTAAGAGGAAGATAGACTTGGTTTATGGTGGGGGAAGTGTTGGGCTGATGGGCTTGATATCTCGGAGAGTGTCTGATGGAGGTTGCCATGTCCTCGGGATAATTCCAAAAGCTCTCATGCCTCTTGAGATATCTGGTGAAACGGTAGGTGAAGTGAGAATTGTTTCAGATATGCATGAGCGTAAAGCTACAATGGCTCGAGAAGCTGATGCATTTATCGCTCTGCCCGGAGGATATGGAACCATGGAAGAGCTGTTGGAGATGATAACTTGGGCCCAACTTGGAATTCATAAGAAACCGGTTGGTCTACTAAATGTTGATGGTTACTATAACTGTTTGCTTGCATTATTTGACAATGGAGTTAAAGAAGGTTTCATTAAGCCTGGTGCTCGGAATATAGTTGTCTTGGCTCCTACGGCCAAAGAACTTATGATGAAGATGGAGCATTACTGTCCTTCGCATGAACATGTCGCTCCTCATGAGAGCTGGAAGATGGAGCAATTAGGTAAATACCCAGGACAAGAAAATGCGGAGTGA 651 0.4516 MEEGFHRSKFKKVCVFCGSNSGNRKVFSDAAIDLGHELVKRKIDLVYGGGSVGLMGLISRRVSDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKATMAREADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVKEGFIKPGARNIVVLAPTAKELMMKMEHYCPSHEHVAPHESWKMEQLGKYPGQENAE 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1739 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Glsi08g1739 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Glsi08g1739 216 PANTHER LOG FAMILY PROTEIN YJL055W 7 209 - -
Glsi08g1739 216 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Glsi08g1739 216 NCBIfam Rossman fold protein, TIGR00730 family 11 188 IPR005269 GO:0009691|GO:0016787
Glsi08g1739 216 Gene3D - 9 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1739 Glsi-ChrGlsi08 12400260 12402547 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0527 10 3311256 3313473 Glsi08g1739 08 12400260 12402547 CCT