Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1715 ATGGTAGGAGAAAACGTGAACAGGGTAATTGATGCCTGTCTAAGAGAGGAGGTGGGAAAAAGTTTGAGAGAAAGGGAGGTAGCAATGAGAGCAGAATGGCACGCTTTGAACAAACAAGCAGAGGCATTTGAGGAAGGGAACAGAAAGACTGGTGATAAATGGTGGCCGCTTAAAGCCAAATTTCTCTTGCAAGTTGATCTCACTCGAGGACATACAAACGGCGTCGTTAGTGTATGGACACCGCAGTCAGTCATCGTGTGGCAGCCTGAAGGGAGTGGACCAAGCAGGGATTCCGAAGTCACAGAAAAGGAAATGAAAGCGTCGGCAAGATCCTCACTGCTTATCTCCAAGACTGGGAATCTCCAACACGCTTTCTCTTTCCCTCCTCGCTCCCTTCATTCTTCTAAACCCTTCCTCAGCTCTCTCCCTTGTTTCTCTCCCACAAGTCTCCATCACAAACTCAATCTCAATCGGATCCATCTCACCCACCAGTTTCAATTTCACACTGCGTCTTCTCCTATAATGGCGTCTTCGTTTAACCCAGAAAGGGCCCGGGCCCCTCCATCCATTCCTATGCCCAATCCCCCAGTCACCAAGTTCAAGATTGGGCTTTGTCAACTATTGGTGACTCCCGATAAGGAGAGGAACATTGCGCATGCTCGGAAGGCCATTGAGGAGGCTGCAGAAAAGGGAGCACAGCTTGTTCTCTTGCCTGAAATATGGAATAGTCCCTATTCAAATGATAGTTTCCCCATCTACGCCGAGGATATTGATGCCGGTGACGATGCATCTCCTTCAACTGCTATGCTGTCTGAAGTTTCTCGTCTCTTAAAAATCACGATAGTTGGAGGCTCCATACCTGAACGTTATGAAGGCCGGTTATACAACACGTGTTGTGTCTTTGGAACCGATGGAAAGCTAAAAGCCAAACACCGCAAGATACACCTTTTTGATATTGACATTCCTGGAAAGATTACCTTTATTGAATCAAAAACTCTTACTGCTGGGGAGACTCCTACCATTGTGGACACAGAAGTTGGGCGCATAGGTATAGGCATTTGTTACGATATCCGATTTCAGGAATTAGCAATGATATATGCAGCAAGAGGTGCTCACTTGCTCTGCTATCCTGGGGCATTTAACATGACTACTGGACCATTGCATTGGGAGTTATTGCAGAGGGCAAGGGCTACTGATAATCAGTTATATGTGGCAACCTGTTCACCTGCTCGGGATACTGGATCTGGTTATGTGGCTTGGGGGCACTCCACTCTTGTTGGGCCATTTGGAGAAGTTTTGGCTACTACAGAACAGGAGGAGGCAATCATCATAGCAGAAATTGATTATTCATTGTTACAGCAGAGAAGGACAAGCCTCCCCTTGACAAAGCAAAGGCGAGGTGATCTTTACCAATTGGTGGATTTTCAGAGGTTGAGTTCCCAATGA 1446 0.4675 MVGENVNRVIDACLREEVGKSLREREVAMRAEWHALNKQAEAFEEGNRKTGDKWWPLKAKFLLQVDLTRGHTNGVVSVWTPQSVIVWQPEGSGPSRDSEVTEKEMKASARSSLLISKTGNLQHAFSFPPRSLHSSKPFLSSLPCFSPTSLHHKLNLNRIHLTHQFQFHTASSPIMASSFNPERARAPPSIPMPNPPVTKFKIGLCQLLVTPDKERNIAHARKAIEEAAEKGAQLVLLPEIWNSPYSNDSFPIYAEDIDAGDDASPSTAMLSEVSRLLKITIVGGSIPERYEGRLYNTCCVFGTDGKLKAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFQELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSGYVAWGHSTLVGPFGEVLATTEQEEAIIIAEIDYSLLQQRRTSLPLTKQRRGDLYQLVDFQRLSSQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1715 481 Gene3D - 197 475 IPR036526 -
Glsi08g1715 481 FunFam Omega-amidase chloroplastic 197 475 - -
Glsi08g1715 481 PANTHER NITRILASE-RELATED 178 473 - -
Glsi08g1715 481 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 200 449 IPR003010 GO:0006807
Glsi08g1715 481 Pfam Carbon-nitrogen hydrolase 202 456 IPR003010 GO:0006807
Glsi08g1715 481 CDD nit 201 466 IPR045254 GO:0016811
Glsi08g1715 481 SUPERFAMILY Carbon-nitrogen hydrolase 198 473 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1715 Glsi-ChrGlsi08 12208414 12217223 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1715 08 12208414 12217223 Glsi08g1715 08 12208414 12217223 ECH