Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1714 ATGGCAAAGAAACACAGCAGAAGCAATGGCAAATGTAACAAAGCCATGAAAGAGGAAGATGTGCAAACGGCAAATCTTCGCCGAGCTTGTTTAGTAGAAAAATGGATGGATAAGAAGGGGAGACAACGCCCGACAGACTTGGACGACCAAGATGTTGTATTTTTCAGTTCCACTTCAAGTTCTTCGGATTCTAGTTCGGGAAGATTCTCGTCCTCCGACACAGAGTCCACGTACGGAGTGAGATCACGGGCGTCGTGTTTCGCGCCGAGACCGAAGCCGGTGAGGTCAGAAAGATCGGAGAAGACTGATAGAAGACAGAGCGCTCAGTTTTATGATGGTTATGATAAAGGTTGCAACACAGGACGTATTGCAAGTCATGATGAAAGACTAATGAAATCAAAATCGAGGGCCCTGAAGATTTACGATAATCTTAAGAAGGCAAAGCAACCCGTTTCTCCCGGGGGCAGGCTCACGAATTTTCTCAACTCTCTTTTTACAACAGGGAATACAAAGAAAACTAAGAGCACGTCCTCTGTTGGAGGCGGCCAAGACGTAAACGCTGAGAGGAAATCAAAGTCGGGGCAAGCTTCAACCTGTTCTTCTGCATCTTCATTCTCACGGTCTTGTTTGACCAAAACCTCGCTTTCTTCCAGAGAAAAGTTGCACAACGGAGTTAAAAGAACAGTCCGTTTCTTCCCAGTAAGCGTGATCGTCGATGAAGATAGTCGACCTTGTGGGCATAAATGCTTGTATGAAGAGGACGACACTAGTTTGATGCCTGTGTCGGTGCCAACCGCCTGGAAAATTGGGCGCAAGAAGAAGGATGAAGAGCTAAAACTCCCGGTCATGGAGAAGAGCCGGCGAGTAGAAGAAGCTGCCAGAGAGTTCTTAAAAGAGTACCATCAAAACCAGAAGAAAAGCGATTTACTTTTGAGGGATTTTCCCGTTAGGACAAACTTGGTTGAGGATGAAGAAGATGATGATGACGACGACGACGCAGCAAGCTATTCAAGTTCGGATCTTTTCGAGCTTGATCACTTGGCGGTAATGGGAAATGGTAGGTATTCTGAGGAGCTTCCGGTGTATGAGACTACTCATTTTAGTACTAACCGCGCCATCGATGCCGAGAGTAGTCTGATGGAGAAGTTGGAAAAGAAAGGAAGCAAGAGAAGGAGGAGGGAAAATGAGAGATTCGAGATCGTAACGAGAAGCAGCATGAGAGGGTATGATGGTAAAGGGAAAGACAGATCTTCTCCCATGGGAATAGAGAAAGCGAAGACTGAAGCTTTTGCTTTCTTTCTTTCCTCCTTCTTGCTCTCTCTAGAACTTGAAAATACGAGGGAAGCTTTTGATGATGGGGAAGCAAGAGTGGAGATAGTATGTGCTTTGTTTTGGACACTAGTTGGGACACAGTGCACTGCAAACTCTGCTGAAATATGA 1440 0.4576 MAKKHSRSNGKCNKAMKEEDVQTANLRRACLVEKWMDKKGRQRPTDLDDQDVVFFSSTSSSSDSSSGRFSSSDTESTYGVRSRASCFAPRPKPVRSERSEKTDRRQSAQFYDGYDKGCNTGRIASHDERLMKSKSRALKIYDNLKKAKQPVSPGGRLTNFLNSLFTTGNTKKTKSTSSVGGGQDVNAERKSKSGQASTCSSASSFSRSCLTKTSLSSREKLHNGVKRTVRFFPVSVIVDEDSRPCGHKCLYEEDDTSLMPVSVPTAWKIGRKKKDEELKLPVMEKSRRVEEAAREFLKEYHQNQKKSDLLLRDFPVRTNLVEDEEDDDDDDDAASYSSSDLFELDHLAVMGNGRYSEELPVYETTHFSTNRAIDAESSLMEKLEKKGSKRRRRENERFEIVTRSSMRGYDGKGKDRSSPMGIEKAKTEAFAFFLSSFLLSLELENTREAFDDGEARVEIVCALFWTLVGTQCTANSAEI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1714 479 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 18 375 IPR039621 GO:0009734
Glsi08g1714 479 MobiDBLite consensus disorder prediction 1 111 - -
Glsi08g1714 479 MobiDBLite consensus disorder prediction 51 81 - -
Glsi08g1714 479 MobiDBLite consensus disorder prediction 170 202 - -
Glsi08g1714 479 MobiDBLite consensus disorder prediction 93 110 - -
Glsi08g1714 479 MobiDBLite consensus disorder prediction 31 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1714 Glsi-ChrGlsi08 12205987 12208109 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1714 08 12205987 12208109 Glsi08g1714 08 12205987 12208109 ECH
Glsi08g1714 08 12205987 12208109 Glsi07g0513 07 4564470 4565693 ECH
Glsi07g0513 07 4564470 4565693 Glsi08g1714 08 12205987 12208109 ECH