Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1702 ATGCTGTCTTTTGTAACAGAAAATATGGGCTTACTCTGCAGCAGAAATCGTCGTTATAGTGACGCCAATTCTGAAGAAAATGCTCAGGCTGAAGAAATTGAAGAAAGAATAGAGCTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTTCTACTACTTGGTGCTGGAGAGTCAGGGAAGTCCACAATCTTTAAGCAGATTAAACTCTTGTTTCAAACTGGCTTTGATGAGGCAGAGCTCAAAAGTTACATCCCAGTCATTCATGCTAATGTGTATCAGACAATAAAAATACTGCATGATGGGTCAAAGGAATTAGCTCAGAATGAAACCAAGTCTTCAAAGTATGTGATATCCAATGAAAATAAGGATATCGGAGAGAAACTATCAGAAATTGGAGGCAGGCTGGATTATCCACGTCTCACCAATGAACTTGTGCAGGATATAGAAACTCTGTGGAAAGATGCTGCAATTCAGGAAACATATGTCCGTGGTAATGAGCTCCAAGTTCCAGATTGTGCCAATTATTTTATGGAAAATTTGCAGAGACTGTCTGATGCTAATTATGTTCCAACGAAGGAGGATGTTCTGTATGCAAGAGTTCGAACCACTGGTGTTGTAGAGATCCAGTTCAGCCCTGTTGGAGAAAACAAGAAAAGTGGTGAGGTATATAGGCTCTTTGATGTCGGAGGCCAGAGAAATGAGAGGAGAAAATGGATTCATCTGTTCGAGGGAGTTACTGCTGTAATATTCTGTGCTGCTATTAGCGAATATGATCAAACACTTTTTGAGGATGAAAACAAAAACAGAATGATGGAGACTAAGGAGCTTTTTGAGTGGGTCCTGAAGCAACCGTGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTCGAGAAGAAGATCCTAAAAGTCCCACTTAATGTCTGCGAGTGGTTCAAAGATTACCAGCCAGTATCCACTGGGAAACAAGAGATTGAGCACGCATACGAGTTTGTGAAGAAAAAATTTGAGGAGTTGTATTTTCAGAGCACTGCTCCTGATCGCGTAGATCGTGTCTTTAAGATCTATCGGACTACTGCTCTTGATCAGAAGCTCGTGAAAAAGACTTTCAAGCTTGTGGATGAGACTTTGAGGCGGAGGAATCTCTTTGAGGCCGGCTTATTGTGA 1179 0.4037 MLSFVTENMGLLCSRNRRYSDANSEENAQAEEIEERIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYIPVIHANVYQTIKILHDGSKELAQNETKSSKYVISNENKDIGEKLSEIGGRLDYPRLTNELVQDIETLWKDAAIQETYVRGNELQVPDCANYFMENLQRLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYDQTLFEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEELYFQSTAPDRVDRVFKIYRTTALDQKLVKKTFKLVDETLRRRNLFEAGLL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1702 392 Coils Coil 16 43 - -
Glsi08g1702 392 SUPERFAMILY Transducin (alpha subunit), insertion domain 75 200 IPR011025 GO:0007165
Glsi08g1702 392 PRINTS Alpha G protein (transducin) signature 49 64 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 PRINTS Alpha G protein (transducin) signature 245 273 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 PRINTS Alpha G protein (transducin) signature 188 210 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 PRINTS Alpha G protein (transducin) signature 223 240 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 PRINTS Alpha G protein (transducin) signature 291 300 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 CDD G-alpha 48 386 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 388 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 FunFam Guanine nucleotide-binding protein alpha-1 subunit 76 201 - -
Glsi08g1702 392 Gene3D - 76 201 IPR011025 GO:0007165
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 85 98 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 278 289 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 100 114 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 124 138 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 208 223 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 327 342 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 344 356 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 PRINTS Plant G protein alpha subunit signature 35 44 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Glsi08g1702 392 FunFam Guanine nucleotide-binding protein alpha-1 subunit 186 379 - -
Glsi08g1702 392 Pfam G-protein alpha subunit 29 380 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 389 IPR027417 -
Glsi08g1702 392 Gene3D - 49 380 IPR027417 -
Glsi08g1702 392 SMART galpha_1 27 391 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Glsi08g1702 392 ProSiteProfiles G-alpha domain profile. 46 392 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1702 Glsi-ChrGlsi08 12121211 12125499 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1702 08 12121211 12125499 Glsi08g1702 08 12121211 12125499 ECH