Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1697 ATGATGAGCGTAATCCAGAAAGGATCCCAAAATGACACGAAGCTGAGCTCCCCAGACAAGGTAACTGCTTTGAATCCGAATGCGGCAGAGTTTATTCCTTTTGCCCTCAGATCATCGACCTCTGGAAGTACCAGCTTGGTAGATGCAACAGTAAGATTCACTACTGCTGGAGCTCTTGGGAAAGCTGTTTTAGATCGATCAGAGTCATCCATTTCAAATAATTCTGATGATGAGGCCCACCAATACTGGCGTTGTCAGCTCCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAAGACGAGCCCCAAGGATTTAACAGCCTCTCTTTAGCAGGTTTATCCATACATGATGACAGTGAAGCATCAAGATTTCCTTCTTCTAAAGGAAGCAGATATATATTAAATGAGCAGCAGGAATTATCACAACAGCACCTTAATGGCAATAGCTTTGCTGATAAATTAAGATTTTCCAATTCAATCTACGGGGAGGATCCATCATCAGCAAGCTTTCTGAACACTTTAACAAAGCCTTGGGATATGCAAATTGGGAATACCAACCAGCATGTTGGTAGTGTTCGAGAGGGACTTACTTATGATGACAACTCTAGACATGAATTCTTAAATGAGCTTTTGGGTGAGCAATCTATTGTGGATGGAACTGATATGAACCCTTTGGAACTTTTGGCTTCTCAATTCCCTGGTTTTGCTGCTGAAAGCCTTGCAGAAGTTTACTTTGCCAGTGGATGTGATTTAAATCTGACCATTGACATGCTCACTCAGTTAGAGCTTCAAGTTGATGGTAATTTCAATCAGAATCTGAATTCAAAGACTTTGTCAGCTCCCAATCTCAGTGCAATGGACTTTCCTGCACTTACTTCGTCAGCTGGCCAGAATACTTCTGTGAAATATGCTGCAGATAACATCCAACAAAGTGCCAATCCCTACCGATCACCTGACAAGGATATGCTCTTTTTCAAGTCTAGCTCTTCAGTTTCATCTAGAGGCACTGTTGACTTTGCTTCTGCTGTCAGGAAATTGGCTTCCCAGGATTCTGGTATATGGAAGTATGATAAAAATGGTTCTGGTGATGATGCCATTGGCTCAAGTAGAAGTTCTCATGTTCTGGCTAGTGCCTACAATGGTGGGCAGGGGAGAGCCAATTTTAGTGATAGGTTGCAGAACCGTGGTTCTGCTCGGGCAGCTCCTGTTTGGCTTGAAACTGGTGACACAGTTGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATGCATATTTTGAGCAGGCACGGCAAGCATACCTCATCGGAAATAAGGCTCTAGCAAAGGAACTGAGTGTGAAAGGGCAATTATACAACATGCGCATGAAAGCAGCTCATGGAAAAGCTCAAGAATCCATTTACCGCCAGAGGAATCCAGTTGCTCCAGAGATGCAGGGCAATGGAAGAGGAAATGAGAGGATGATAGACCTACATGGGCTGCATGTAAGTGAAGCCATTCATGTGCTAAAACATGATTTGAGTGTGCTAAGAAGCACCGCCAGAGCTGCTGAGCAGCGTTTGCAGGTTTTTATATGTGTTGGTACGGGTCACCATACCAGGGGTTCCCGCACTCATGCAAGACTTCCGGTAGCTGTACAACGTTATCTTCTTGAAGAAGAGGGTCTAGACTACACAGAACCACAGCCGGGGCTACTTCGAGTTGTGATATATTGA 1737 0.445 MMSVIQKGSQNDTKLSSPDKVTALNPNAAEFIPFALRSSTSGSTSLVDATVRFTTAGALGKAVLDRSESSISNNSDDEAHQYWRCQLPDDITPDFKVMGEDEPQGFNSLSLAGLSIHDDSEASRFPSSKGSRYILNEQQELSQQHLNGNSFADKLRFSNSIYGEDPSSASFLNTLTKPWDMQIGNTNQHVGSVREGLTYDDNSRHEFLNELLGEQSIVDGTDMNPLELLASQFPGFAAESLAEVYFASGCDLNLTIDMLTQLELQVDGNFNQNLNSKTLSAPNLSAMDFPALTSSAGQNTSVKYAADNIQQSANPYRSPDKDMLFFKSSSSVSSRGTVDFASAVRKLASQDSGIWKYDKNGSGDDAIGSSRSSHVLASAYNGGQGRANFSDRLQNRGSARAAPVWLETGDTVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQLYNMRMKAAHGKAQESIYRQRNPVAPEMQGNGRGNERMIDLHGLHVSEAIHVLKHDLSVLRSTARAAEQRLQVFICVGTGHHTRGSRTHARLPVAVQRYLLEEEGLDYTEPQPGLLRVVIY 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1697 578 MobiDBLite consensus disorder prediction 1 21 - -
Glsi08g1697 578 CDD CUE_CID7_like 224 265 IPR041806 -
Glsi08g1697 578 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 2 578 - -
Glsi08g1697 578 Gene3D - 463 577 IPR036063 -
Glsi08g1697 578 SUPERFAMILY SMR domain-like 494 576 IPR036063 -
Glsi08g1697 578 Pfam Domain of unknown function (DUF1771) 416 479 IPR013899 -
Glsi08g1697 578 ProSiteProfiles Smr domain profile. 496 578 IPR002625 -
Glsi08g1697 578 SMART SMR_2 493 578 IPR002625 -
Glsi08g1697 578 SMART DUF1771_2 415 480 IPR013899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1697 Glsi-ChrGlsi08 12093111 12096394 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1697 08 12093111 12096394 Glsi08g1697 08 12093111 12096394 ECH