Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1657 ATGACTTTGGGTCTGTCAACAATTTGTGTCAACGATATGTTGTTTCGACATCGAATGTTGGTTCTTCTTTTGGTAATTTCTGCTGAGAGATGCAGAATGGCAGCGGCAGAATCGAGTCCTGAGTCGGGCAATGATTACACGTTAAATTCGGTGAGAGAGGCTTTGGTCAGACAAGAAGATACCATCATTTTTAGTCTCATTGAAAGAGCCAAGTTCCCAATCAATTCTCACACCTACGATCAAAATTACACTTCCATTCCGGATTTCTGTGGCTCAGTGGTGGACTTCATTGTCAAGAATACAGAGGCCGTTCAAGCTAAAGCAGGTAGGTATAAAAACCCTGAAGAGAATCCCTTCTTCCCAGAAAGTTTACCGTCGTCATTTGTGCCAAATTACCCCTTCTCACAGATTTTGCATCCAGGAGCCGCTTTGGTTAACATAAACAAGTCCATTTGGAAAATTTACTTTCATGAGGTGCTTCCATTGTTTGTTGCTTCGGGTGATGATGGAAACTATGCACAAACTGCAGCTAGTGATCTTTCGTTATTGCAGGCCATCTCTAGAAGGATCCATTACGGGAAGTTCGTAGCAGAGGTGAAATTCAGGGAATCTCCTCAGGACTACGAGCCTTTAATTCGTGCTCGGGACAAAGAAGCGTTGATGAAATTGTTGACATTCGAGAGCGTAGAAGAGATGGTGATTAAGAGGGTTCAAAAGAAGGCCATGGTTTTTGGACAGGAAGTAAGCCTTGACCGCAATGATGACGAGGAGAAATTCAAGGTTGATCCTTCCCTAGTTTCTAGCCTGTACAAAAAATGGATAATACCTCTAACCAAGCTTGTTGAGGTCGAGTACCTCCTACGCCGCCTCGATTGA 876 0.4349 MTLGLSTICVNDMLFRHRMLVLLLVISAERCRMAAAESSPESGNDYTLNSVREALVRQEDTIIFSLIERAKFPINSHTYDQNYTSIPDFCGSVVDFIVKNTEAVQAKAGRYKNPEENPFFPESLPSSFVPNYPFSQILHPGAALVNINKSIWKIYFHEVLPLFVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPQDYEPLIRARDKEALMKLLTFESVEEMVIKRVQKKAMVFGQEVSLDRNDDEEKFKVDPSLVSSLYKKWIIPLTKLVEVEYLLRRLD 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1657 291 PIRSF Chor_mut_AroQ_eu 34 291 IPR008238 GO:0004106|GO:0009073
Glsi08g1657 291 ProSiteProfiles Chorismate mutase domain profile. 39 291 IPR008238 GO:0004106|GO:0009073
Glsi08g1657 291 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 41 291 IPR037039 GO:0004106|GO:0009073
Glsi08g1657 291 SUPERFAMILY Chorismate mutase II 44 291 IPR036263 GO:0046417
Glsi08g1657 291 FunFam Chorismate mutase 39 291 - -
Glsi08g1657 291 NCBIfam chorismate mutase 47 291 IPR008238 GO:0004106|GO:0009073
Glsi08g1657 291 PANTHER CHORISMATE MUTASE 29 291 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1657 Glsi-ChrGlsi08 11813237 11815369 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1657 08 11813237 11815369 Glsi08g1657 08 11813237 11815369 ECH