Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1607 ATGCAGAGACGGAGTCCTCCCAAACACAGGCACGATGGGACTTCGCCGCTGCCTCTTGGGATGGACTGGAGTCCTCCACCACGAAAATGGAATGGCCAGGATACGGTATGGCCTCACGATCATCGTACAGGTTGGAGTTATTGTGTCACAGTACCTTCTTGGGTCTTCCTTCCAAAATCAAGAAATTCAGATCCTATAGTGTTCTACAGGGTTCAAGTTGGTGTACAATCACCAGAAGGGATCACAACACTCCATGGAGTACTAAGAAGGTTCAATGATTTTTTAAAGTTGTTTGCAGATCTTAAAAAGGAGTTTCCCAGGAAAAATATTCCTCCAGCTCCACCCAAAGGGCTCTTGCGCTTGAAAAGCCGAGCATTGTTGGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAGCTGTTGTCTGACATTGATCTATCAAGATGTGCTGCAGTGGCATCCTTTCTTGAATTAGAAGCTGCAGCTAGATATTCATTCCAAGATGCAAATCAGCAGAATTCAGAAACAGATCCTGCTTCCAATAACACAGCTTATTCAGTGCAATCACCTGTCCATCCAAGGTTATCATTAGTTGCTGGCAGTTCATCTGTTGCATCAGATTATGGTAGTGATACTGCATATGAACCATCTGATCTTGGAACACCAAGAGTTGGACAGGATGATAATTCTGAAGTTGGCACAGATGATTTAACATTAGATGAAGATATAACAAATCCAATAGAAAAGCTTGTCAAGTATGGCATATCAAATATTGATGAGGGTTTATTTATGGGTCAGACTATTCTAGAGCAACTGGAAGGCCTTCCGAGGCATAAAGTAAATGCCAGACATGTCAACAACGTTGCAGAGAAGAACAAAAATAATGGAAATTCTTATAATGCTTCACTTTTAGCTAATAACGCCATGGAGCTTTTCTCTGAGCCTGAGCATGCTAAGGTTATTGGTCATGTTCGTAAGCTTTCAAATGAGAGTGTTGGAAGTGATGGAAGCTCTCTGCGAGGTAGTGACTTTTCTAATTCTGGAATTCCAAATTCATCTGGTGATGGCTCTCATGACCATCCTGGAAATACTTTGGTATCCAGAACAAGAGATATTATGGGTCACCCAGAGTTCCAGTTTACTGGTGATGCTCAAGTAGTCATTCCACTGGATCAGCGCCATAAATTGAATAGAATTCTTTTAACCATGCAGCGAAGGCTAGTCACTGCAAAAACTGATATGGAGGACATTATAGTTAGATTGAATCAAGAAATTGCTGCAAAGGATTTTCTTGCAACAAAGGTTAAGGATTTGGAAGTAGAGCTTGAAACTACCAAACAGAAAAATAAAGAGAACTTGCAACAGGCTATTCTGATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTCGGCGAAAGTCATTGGAAATGGAGATGAAACTAAAGTCTGAATTGGGTGGAAATTCAAGTCAGAATTTGACAAACGAATCAGTTGTTCAGGAGAGAGAACTGTTGCAGACTTTAACTGCTACTAAAGATCAGCTGGAAATTTTGTCAAAACAGTATGATGAGCTAGAAGCAAAATCCAAAGCGGATGTTAAAGTCCTGGTTAAAGAGGTCAAATTTCTCCGAAATTCCCTAACAAGAATGAAGGAGGAGCTTAGTGAGTCAATAAATGAAAAGTGTGAAGCTGAGAAACTTCTTCAACATGAAAGAGAGAAGAGGGAACATGCAGAATCTGCTTCGAGAAAGCTGGTGCAGAAATGCAGGCTTATTTTCAACCAGCTTCAACAGTGCAATATCAATTTTCCTACAGAAGATGAAGATAACACAATCATGAACTCATCATCATTAGAAGACACTATAAATCAATTAGCTATATCTGATGACCAAATTGGTGACCTACTGGCAGAGGTAGAAAACTTGGGGAAGGACACGGGAAATTCTATTTCTGATGTAGATAAAATCAGTGACATAAAAGATGACTTCATCTATGATGATGAATTGCGAAAGATCATAGCAGATTTGTTCATCGACAATGCTAGATTGAGAAAGCAGATGAACTGTATTACAAGGCAGGCTCTCAGATTGGACATGTCAGCAGGTGACTCCAATGAAGACCGTAACAAGTAA 2148 0.4055 MQRRSPPKHRHDGTSPLPLGMDWSPPPRKWNGQDTVWPHDHRTGWSYCVTVPSWVFLPKSRNSDPIVFYRVQVGVQSPEGITTLHGVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLLRLKSRALLEERRCSLEEWITKLLSDIDLSRCAAVASFLELEAAARYSFQDANQQNSETDPASNNTAYSVQSPVHPRLSLVAGSSSVASDYGSDTAYEPSDLGTPRVGQDDNSEVGTDDLTLDEDITNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKVNARHVNNVAEKNKNNGNSYNASLLANNAMELFSEPEHAKVIGHVRKLSNESVGSDGSSLRGSDFSNSGIPNSSGDGSHDHPGNTLVSRTRDIMGHPEFQFTGDAQVVIPLDQRHKLNRILLTMQRRLVTAKTDMEDIIVRLNQEIAAKDFLATKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSELGGNSSQNLTNESVVQERELLQTLTATKDQLEILSKQYDELEAKSKADVKVLVKEVKFLRNSLTRMKEELSESINEKCEAEKLLQHEREKREHAESASRKLVQKCRLIFNQLQQCNINFPTEDEDNTIMNSSSLEDTINQLAISDDQIGDLLAEVENLGKDTGNSISDVDKISDIKDDFIYDDELRKIIADLFIDNARLRKQMNCITRQALRLDMSAGDSNEDRNK 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1607 715 SMART PX_2 55 160 IPR001683 GO:0035091
Glsi08g1607 715 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Glsi08g1607 715 MobiDBLite consensus disorder prediction 331 369 - -
Glsi08g1607 715 Coils Coil 429 456 - -
Glsi08g1607 715 Gene3D - 47 186 IPR036871 GO:0035091
Glsi08g1607 715 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 711 IPR044588 GO:0015031
Glsi08g1607 715 MobiDBLite consensus disorder prediction 331 364 - -
Glsi08g1607 715 MobiDBLite consensus disorder prediction 1 26 - -
Glsi08g1607 715 Coils Coil 513 533 - -
Glsi08g1607 715 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Glsi08g1607 715 Pfam PX domain 87 158 IPR001683 GO:0035091
Glsi08g1607 715 Coils Coil 538 565 - -
Glsi08g1607 715 MobiDBLite consensus disorder prediction 208 237 - -
Glsi08g1607 715 FunFam Phox (PX) domain-containing protein 46 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1607 Glsi-ChrGlsi08 11461266 11467050 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1607 08 11461266 11467050 Glsi08g1607 08 11461266 11467050 ECH