Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1600 ATGTCTCTGAAACCGTCCGATTCGTCGGAGAGTCTGATACTGCCGGTATCGGATCCTCCAAATGATCAATATGGAGAGAAGCTCTTCAAGGGTTCTGCCATGACCCGACGAGGAGCCTACGCCGCAATCTCTTACATGTCATGCGCAGTGCTCTTGGTGATGTTCAATAAGGCAGCTCTTTCATCCTATGACTTCCCATTTGCAAATGTCATCACGCTTCTTCAGATGATATGTTCTTGTTGTTTACTGTATGTATTGAGGCGCTGGAGGTTAATTTCTTTCAAAGCAGGTGAATCCTTGATTTTTGCTGATAACTCAACAAAATTTGTACCTCTGAAGACTTTGAGCCACACTCTTCCTCTGGCAGGAACATATTTACTTTACATGCTAGTCATCATGGAGTCTGTTCGTGGAGTGAATGTTCCAATGTACACCACCCTTAGGAGGACAACAGTGGTATTTACGATGCTCGTGGAGTATATTCTGGTGAGGCAGAGGTATACATCATCTGTTATTTTCAGTGTTGGCCTGATTGTCTTTGGTGCATTTATTGCGGGAGCACGGGACTTCTCTTTTGATGCTTATGGCTATGTTGTTGTTTTAATGTCAAACATCGCCACAGCAATATATCTTGCAACTATAGCCCGTGTTGGTTGAAAAACCAGTGGCCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTATCATATGTGGACCAGTTTTGTTTATTTGGACATCAATTCAGGGTGACTTGAAGATGACAATGAATTTTCCTTATTTGTTTTCGCCTGGATTTATTGTTGTTCTACTCTTCTCCTGCATACTGGCTTTCTTCTTGAATTACAGTATTTTCCTGAACACAACTCTAAATTCAGCTCTGACTCAGACAATTTGTGGTAATCTGAAGGATCTGTTTACAATTGGCCTTGGTTGGATGATTTTTGGTGGGCTACCATTTGATTTTTGGAATGTAATTGGACAACTTCTTGGTTTTGCCGGCTCTGGTTTATATGCCTACTATAAGCTGATTGGCAAATAA 1038 0.4152 MSLKPSDSSESLILPVSDPPNDQYGEKLFKGSAMTRRGAYAAISYMSCAVLLVMFNKAALSSYDFPFANVITLLQMICSCCLLYVLRRWRLISFKAGESLIFADNSTKFVPLKTLSHTLPLAGTYLLYMLVIMESVRGVNVPMYTTLRRTTVVFTMLVEYILVRQRYTSSVIFSVGLIVFGAFIAGARDFSFDAYGYVVVLMSNIATAIYLATIARVGXKTSGLNSFGLMWCNGIICGPVLFIWTSIQGDLKMTMNFPYLFSPGFIVVLLFSCILAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIGLGWMIFGGLPFDFWNVIGQLLGFAGSGLYAYYKLIGK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1600 345 Pfam Triose-phosphate Transporter family 48 337 IPR004853 -
Glsi08g1600 345 PANTHER SOLUTE CARRIER FAMILY 35 40 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1600 Glsi-ChrGlsi08 11437460 11443082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1600 37 341 Organic Solute Cotransporters AT1G77610 23.948 2.04e-13 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0689 10 4408792 4412792 Glsi08g1600 08 11437460 11443082 CCT
Glsi08g1600 08 11437460 11443082 Glsi08g1600 08 11437460 11443082 ECH