Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1598 ATGGCGCCGAGTACGATTCGGAAGGCGATTGGGGCAGTGAAGGACCAGACCAGTATTGGGATAGCGAAGGTGGCTAGCAATATGGCACCGGACCTCGAGGTGGCGATCGTCAAAGCGACGAGTCACGACGATGACCCGGCCAGCGAGAAATACGTACGCGAGATCTTGCACTTGATGTCTTTCTCACGCGGCTATGTTCATGCTTGTGTGTCCGCGGTGTCCAAGCGTTTGGGGAAGACCCGGGACTGGATCGTGGCGCTCAAGGCACTGATGCTTGTGCACAGGTTGCTGAATGAGGGTCCCCCCTTGTTTCAAGAGGAGATCTTGTATGCCACGAGGAGGGGAACCAGGCTTCTCAACATGTCCGATTTCAGGGATGAGGCTCACTCCAGCTCCTGGGATCATTCGGCTTTCGTCAGGACCTATGCTATGTATCTCGATCAACGGCTCGAGTTGATGCTGTACGACAGGAAAAGTACGAGCGTTGGGGGTGGTAGTGGCGGGGGCAGTGTGGATGATAGATTTGGGGGCGGAGATAATTTTAGGTCGCCGCCTCCGAGGCCGTATGAAAATGAGTATGGAGAATTTAGGGGGGAAAGTGGGTACGGATATGGGATGCGACGGACAAGATCCTTTGGCGATATGAGCGAAACGGTGGGCCGAGAAGGTAGAGAGGACAAAAGGGTTGTGACTCCATTGAGGGATATGAAGCCTGAGAGAATTTTTGGCAAGATGGGTCATCTGCAGAGGCTGTTAGATCGATTCCTGGCTTGTAGGCCTACGGGATTGGCAAAGAATAATAGGATGATTTTGATTGCATTGTACCCTGTTGTCAAGGAGAGCTTTCAGTTATATGCCGAAATTTGCGAGGTTTTGGCTATTTTGCTTGACAAATTCTTTGATATGGAATACCCGGATTGTGTTAAGGCTTTTGATGCTTATGCCAGTGCAGCTAAGCAGATCGATGAGCTTGTTGCCTTCTACAACTGGTGCAAGGATACTGGCGTGGCAAGATCATCTGAGTACCCAGAAGTTCAAAGGATTACTAGCAAGTTACTGGAGACACTGGAGGAGTTTGTGAGGGACAGGGCAAAGAGACCAAAAAGTCCGGAGAGGAGGGAGGAACCTCAGCCTGTAGCTATAGAGGAGGAGCCAGTACCAGATATGAATGAAATAAAGGCATTGCCTCCACCTGAGAATTACACCCCGCCTCCTCCACCTGAGCCGGAGCCTAAGCCACAGCAACAAGTTGCAGAGGACTTGGTGAATCTCAGAGATGATGCTGTCACTGCAGATGATCAGGGCAATAGATTGGCTTTGGCGCTGTTCGCCGGTACACCAGCTAATAATGCAAATGGGTCATGGGAAGCATTCCCATCAAATGGACAGCCAGAAGTGACTTCAGCTTGGCAAACCCCGGCTGCGGAATCTGGGAAGGCCGATTGGGAATTGGCATTGGTAGAGACTGCCAGCAATTTATCAAAGCAAAAGGCAACATTAGGCGGTGGTCTTGATCCGCTATTGTTGAATGGCATGTATGACCAAGGAATTGTTAGGCAGCATGTCGGCACTGCCCAACTGAGTGGAGGAAGTGCAAGCAGTGTTGCATTGCCAGGACCTGGAAAGAGCACAACCCCTGTTTTAGCTCTTCCAGCTCCAGATGGATCTGTGCAGCCAGTTAATCAGGATCCGTTTGCTGCATCATTAACCGTTCCACCCCCGTCATATGTGCAAATGGCCGATATGGAGAAGAAGCAACACTTGCTTGTGCAGGAGCAGCAGCAGTGGCAGCAATATGCAAGGGATGGGATGCAAGGTCAAGCTAGCTTGGCCAAAATGAGTGGAAGTGGATATTATGCTGGGGGTCCTATGCCAATGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCAACCGGGTACTACTATACGCCTTACTGA 1947 0.5095 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPDLEVAIVKATSHDDDPASEKYVREILHLMSFSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLLNEGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLYDRKSTSVGGGSGGGSVDDRFGGGDNFRSPPPRPYENEYGEFRGESGYGYGMRRTRSFGDMSETVGREGREDKRVVTPLRDMKPERIFGKMGHLQRLLDRFLACRPTGLAKNNRMILIALYPVVKESFQLYAEICEVLAILLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERREEPQPVAIEEEPVPDMNEIKALPPPENYTPPPPPEPEPKPQQQVAEDLVNLRDDAVTADDQGNRLALALFAGTPANNANGSWEAFPSNGQPEVTSAWQTPAAESGKADWELALVETASNLSKQKATLGGGLDPLLLNGMYDQGIVRQHVGTAQLSGGSASSVALPGPGKSTTPVLALPAPDGSVQPVNQDPFAASLTVPPPSYVQMADMEKKQHLLVQEQQQWQQYARDGMQGQASLAKMSGSGYYAGGPMPMMPYGMPPVNGMGPPTGYYYTPY 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1598 648 FunFam Clathrin coat assembly protein 3 156 - -
Glsi08g1598 648 MobiDBLite consensus disorder prediction 362 380 - -
Glsi08g1598 648 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Glsi08g1598 648 SMART enth_2 30 160 IPR013809 -
Glsi08g1598 648 Pfam ANTH domain 31 362 IPR011417 GO:0005543
Glsi08g1598 648 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 591 IPR045192 GO:0048268|GO:0072583
Glsi08g1598 648 FunFam putative clathrin assembly protein At2g25430 227 372 - -
Glsi08g1598 648 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Glsi08g1598 648 MobiDBLite consensus disorder prediction 397 413 - -
Glsi08g1598 648 MobiDBLite consensus disorder prediction 362 416 - -
Glsi08g1598 648 SUPERFAMILY GAT-like domain 232 362 - -
Glsi08g1598 648 Gene3D ANTH domain 225 372 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Glsi08g1598 648 CDD ANTH_N_AP180_plant 32 152 - -
Glsi08g1598 648 Gene3D - 2 156 IPR008942 -
Glsi08g1598 648 MobiDBLite consensus disorder prediction 163 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1598 Glsi-ChrGlsi08 11431105 11433051 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1598 08 11431105 11433051 Glsi08g1598 08 11431105 11433051 ECH