Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1567 ATGAGATTTGAAAAGGGAAGTAAAGTGGAGGTCCTTAGCTATAACGAGGTTCCTTCTGGGGAATGGCGATGTGCTGAGATTATCTCCGGTAATGGGAACTCTTACAGTGTCCAGTATGACTCTTCTGGCATGACTAGTGAGGCTATTGTAGAGAGGGTTCCGAGGAAGGCCATCAGGCCTTGTCCCCCTCTTGTAAAATGCGTTGATGGTTGGTTGGCTGATGATGTTGTGGAGGTTTATCATGCTGGTTGTTGGAAAGGGGCTATTGTTTTGATGTTTCTAGGGGGAGACATTTATTTAGTGAGGCTACTAGGTTCTTGTAAGGAGTTAAAAATTCACAAATTTAACATGAGGGTACGCCAATGTTGGCAAGACAACCAATGGGTTTTGATTCGTAAGGTTACAGGCAATTCTGGAATCAGAAAGTGCAGCAGGAATTTGAGTTTGAACAGACATAAGATGAACCCTGAAGCTCTGAAATCTGGTGCTGAAATAAAGCAGCTGGCTGGAAATGATTGTTTTCCGGGACAGGATGGCAGTGGTCTCCAGGAGTCTCATCTAGTCACATCCACTTCATTGAAGAGAGTATCTCCTTACTACTCCTCACCTGTTGAGGCATACCCAAGAAAAATAAGAGCTATTTTGAATAAGGGAGTGCTGGACAAGGTAGATGCTGTTGCTTACCCGCGTGAAAATATGGGTGAAAAATACATGCATACTTCCTTTAATAATGGAAAAAATCAATATTATGAATTGGGGATGGTAAACCCTAATAATGTTACAACACAATTTCTTGAAAGAATTGTAGAACCTAATGAGTCATGTAGTGATGTGTGTTCAGTTGGCAGTTGTAGTGTAATAAGTAATGGCCCAAATAAGTTCTCTAGTGATGTGTTAGCAGGACCCTTCCAAGATGCAGGTTCTCTTTGTAGCGATGCAGAGTCTTTAGATGTTGGAGATGAGGAAGAAAGATGTTCCCTTTCTTCGACAGAGGATATATCAGCAAGAATTCATAGGTTAGAGTTGCATGCTTATCGCAGTACTCTAGAGGCAATGTATGCTTCTGGTCCCTTAACTTGGGAACAAGAAGCCCTATTGACTAATCTTCGTATTTCTCTCCATATTTCAAATGATGAACACCTGATGGAGATAAGGAACTTAATTTCTGCTGGTCAGCGTTTTTAA 1185 0.4143 MRFEKGSKVEVLSYNEVPSGEWRCAEIISGNGNSYSVQYDSSGMTSEAIVERVPRKAIRPCPPLVKCVDGWLADDVVEVYHAGCWKGAIVLMFLGGDIYLVRLLGSCKELKIHKFNMRVRQCWQDNQWVLIRKVTGNSGIRKCSRNLSLNRHKMNPEALKSGAEIKQLAGNDCFPGQDGSGLQESHLVTSTSLKRVSPYYSSPVEAYPRKIRAILNKGVLDKVDAVAYPRENMGEKYMHTSFNNGKNQYYELGMVNPNNVTTQFLERIVEPNESCSDVCSVGSCSVISNGPNKFSSDVLAGPFQDAGSLCSDAESLDVGDEEERCSLSSTEDISARIHRLELHAYRSTLEAMYASGPLTWEQEALLTNLRISLHISNDEHLMEIRNLISAGQRF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1567 394 Gene3D ENT domain 328 391 IPR036142 -
Glsi08g1567 394 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 333 394 IPR005491 -
Glsi08g1567 394 SMART agenet_At_2 1 66 IPR014002 -
Glsi08g1567 394 SMART agenet_At_2 69 125 IPR014002 -
Glsi08g1567 394 Pfam ENT domain 336 387 IPR005491 -
Glsi08g1567 394 SUPERFAMILY ENT-like 330 389 IPR036142 -
Glsi08g1567 394 SMART ENT_2 333 392 IPR005491 -
Glsi08g1567 394 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 365 - -
Glsi08g1567 394 Pfam Agenet domain 6 63 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1567 Glsi-ChrGlsi08 11263812 11265345 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1567 08 11263812 11265345 Glsi08g1567 08 11263812 11265345 ECH