LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi08g1550	ATGGGTTCTCTCAAAGATCAAGAGCAAGCAAAGTGTGTATGGGTTCATGGGCCTATCATTGTAGGTGCTGGACCCTCAGGGTTAGCAGTGGCAGCTTGCCTCTCTGAACATGGGGTACCTTGTGTGATTCTTGAGAAGAGCGACTGTATAGCTTCTCTATGGAAAAACAGAACCTATGATCGTCTCAAACTTCACCTACCTAAACAGTACTGTGAGCTTCCATTAATGGGTTTCCCAGACAATTTCCCAAAGTACCCCACCAAGTACCAGTTCATCTCATACATGGAGTCCTATGCTTCACGCTTCTCAATTCAGCCTAGGTTCAACCAAACCGTTGAGAGTGCAGAGTTCGATCCAAGCTGTGAGCTTTGGACAGTTCGAACTCAGGATTTTGAGTACATTTCGCGGTGGCTTATAGTTGCCACTGGCGAGAATGCGGAGCCCGTCATTCCCAAAATTGCTGGGATGGAGCTCTTTCATGGACCCGTTGCTCATACCAGTGCCTACAAGTCTGGTTCTGATTACAAGAACCAGAAGGTTCTCGTGATTGGCTGTGGCAATTCCGGAATGGAAGTTAGCTTGGATCTTTGTAGATACAATGCCATCCCTCACGTGGTTGCAAGAAATACGGTACATGTTCTGCCCAAAGACATATTAGGCTTCTCCACGTTTGGAATAGCCATGGCCCTCCATAAATGGTTTCCGTTAAGAATAGTGGACAAGTTACTCTTACTGGTGTCTAGTTTCATCCTGGGCAACACGGATCACTGCGGCCTCCGGCGGCCCAAAACTGGCCCAATCGAGCTCAAAGATGCCACCGGAAAAACCCCTGTACTTGATGTTGGGCAACTAGAACATATAAAATCCGGCAAAATAAAGGTGACGGAAGGCGTTAAGGAGATAACGAGAAATGGGGCCAAATTTATGAATGGACAAGAGAAAGTGTTCGATGCTATAATCTTGGCAACGGGATACAGAAGCAACGTGCCTACTTGGCTCAAGAGCTCTGATTTTTTTACCCAAGACGGAATGCCCAAAACACCCTTTCCAAACGGGTGGAAGGGAGAAAATGGATTGTACACGGTGGGCTTCACAAGAAGAGGTCTCCTCGGAACGGCCTCTGATGCCATCAAGATCGCCAACGACATCGCTGACCAGTGGAGGACTGTTAAGGACAACAAGAGTTACTGCAATTCCCATATTATCCTACTCAGGAGTTCATAA	1224	0.4714	MGSLKDQEQAKCVWVHGPIIVGAGPSGLAVAACLSEHGVPCVILEKSDCIASLWKNRTYDRLKLHLPKQYCELPLMGFPDNFPKYPTKYQFISYMESYASRFSIQPRFNQTVESAEFDPSCELWTVRTQDFEYISRWLIVATGENAEPVIPKIAGMELFHGPVAHTSAYKSGSDYKNQKVLVIGCGNSGMEVSLDLCRYNAIPHVVARNTVHVLPKDILGFSTFGIAMALHKWFPLRIVDKLLLLVSSFILGNTDHCGLRRPKTGPIELKDATGKTPVLDVGQLEHIKSGKIKVTEGVKEITRNGAKFMNGQEKVFDAIILATGYRSNVPTWLKSSDFFTQDGMPKTPFPNGWKGENGLYTVGFTRRGLLGTASDAIKIANDIADQWRTVKDNKSYCNSHIILLRSS	407

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi08g1550	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	136	144	-	-
	Glsi08g1550	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	175	199	-	-
	Glsi08g1550	407	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	17	39	-	-
	Glsi08g1550	407	PRINTS	FAD-dependent pyridine nucleotide reductase signature	18	37	-	-
	Glsi08g1550	407	PRINTS	FAD-dependent pyridine nucleotide reductase signature	179	197	-	-
	Glsi08g1550	407	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	15	388	-	-
	Glsi08g1550	407	SUPERFAMILY	FAD/NAD(P)-binding domain	148	325	IPR036188	-
	Glsi08g1550	407	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	33	-	-
	Glsi08g1550	407	Pfam	Pyridine nucleotide-disulphide oxidoreductase	19	210	-	-
	Glsi08g1550	407	SUPERFAMILY	FAD/NAD(P)-binding domain	19	201	IPR036188	-
	Glsi08g1550	407	Gene3D	-	18	389	IPR036188	-
	Glsi08g1550	407	FunFam	Flavin-containing monooxygenase	18	392	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi08g1550	Glsi-ChrGlsi08	11178021	11180086	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi10g0737	10	4674739	4676793	Glsi08g1550	08	11178021	11180086	CCT
	Glsi08g1550	08	11178021	11180086	Glsi08g1550	08	11178021	11180086	ECH